Gm12179 Pseudogene Detail

Summary

• Symbol
  Gm12179
• Name
  predicted gene 12179

• Feature Type
  pseudogene
• IDs
  MGI:3651494
  NCBI Gene: 100416831
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:48442080-48443351 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 28.60 cM

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651494	pseudogene	Chr11:48442043-48443351 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010687	pseudogene	Chr11:47560481-47561752 (-)
A/J	MGP_AJ_G0010682	pseudogene	Chr11:45684625-45685896 (-)
AKR/J	MGP_AKRJ_G0010643	pseudogene	Chr11:47084704-47085975 (-)
BALB/cJ	MGP_BALBcJ_G0010657	pseudogene	Chr11:45888052-45889323 (-)
C3H/HeJ	MGP_C3HHeJ_G0010573	pseudogene	Chr11:47074234-47075505 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010934	pseudogene	Chr11:48984027-48985298 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009572	pseudogene	Chr11:43537242-43538511 (-)
CAST/EiJ	MGP_CASTEiJ_G0010397	pseudogene	Chr11:47245452-47246724 (-)
CBA/J	MGP_CBAJ_G0010546	pseudogene	Chr11:51237243-51238514 (-)
DBA/2J	MGP_DBA2J_G0010583	pseudogene	Chr11:45518344-45519615 (-)
FVB/NJ	MGP_FVBNJ_G0010596	pseudogene	Chr11:45128019-45129290 (-)
LP/J	MGP_LPJ_G0010669	pseudogene	Chr11:47804972-47806243 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010571	pseudogene	Chr11:52705827-52707098 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010907	pseudogene	Chr11:47246407-47247678 (-)
PWK/PhJ	MGP_PWKPhJ_G0010292	pseudogene	Chr11:45916943-45918214 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010101	pseudogene	Chr11:46993018-46994289 (-)
WSB/EiJ	MGP_WSBEiJ_G0010457	pseudogene	Chr11:46880807-46882078 (-)

Homology

• Gene Tree
  Gm12179
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12179
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083954 (Evidence)
• NCBI Gene
  100416831

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083954	Ensembl Gene Model | MGI Sequence Detail	1272	C57BL/6J
transcript	ENSMUST00000118344	Ensembl | MGI Sequence Detail	1272	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6