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Gm11840 Gene Detail
Summary
  • Symbol
    Gm11840
  • Name
    predicted gene 11840
Location &
Maps
more
  • Sequence Map
    Chr4:11999474-12009043 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 5.52 cM
Strain
Comparison
more
  • SNPs within 2kb
    429 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651502
 lncRNA gene Chr4:11999474-12009043 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006387
 lincRNA gene Chr4:8696908-8706477 (-)
A/J MGP_AJ_G0006379
 lincRNA gene Chr4:8552157-8561726 (-)
AKR/J MGP_AKRJ_G0006354
 lincRNA gene Chr4:8644493-8654062 (-)
BALB/cJ MGP_BALBcJ_G0006353
 lincRNA gene Chr4:8470372-8479941 (-)
C3H/HeJ MGP_C3HHeJ_G0006303
 lincRNA gene Chr4:8818533-8828102 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006519
 lincRNA gene Chr4:9100658-9110227 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005811
 lincRNA gene Chr4:8063497-8073656 (-)
CAST/EiJ MGP_CASTEiJ_G0006238
 lincRNA gene Chr4:8646479-8656054 (-)
CBA/J MGP_CBAJ_G0006287
 lincRNA gene Chr4:9364634-9374203 (-)
DBA/2J MGP_DBA2J_G0006308
 lincRNA gene Chr4:8414205-8423809 (-)
FVB/NJ MGP_FVBNJ_G0006331
 lincRNA gene Chr4:8236018-8245584 (-)
LP/J MGP_LPJ_G0006391
 lincRNA gene Chr4:8785548-8795117 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006321
 lincRNA gene Chr4:9543303-9552872 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006524
 lincRNA gene Chr4:8645491-8655057 (-)
PWK/PhJ MGP_PWKPhJ_G0006174
 lincRNA gene Chr4:8437524-8447173 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006088
 lincRNA gene Chr4:8568842-8578516 (-)
WSB/EiJ MGP_WSBEiJ_G0006283
 lincRNA gene Chr4:8711722-8721285 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085027 Ensembl Gene Model | MGI Sequence Detail 9570 C57BL/6J ±  kb
transcript ENSMUST00000156947 Ensembl | MGI Sequence Detail 696 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
    Diseases 1
    Phenotypes 4
  • Earliest
    J:144929 Cook SA, et al., A Mouse Model for Meckel Syndrome Type 3. J Am Soc Nephrol. 2009 Apr;20(4):753-64
  • Latest
    J:282558 Collin GB, et al., Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss. Cells. 2020 Apr 10;9(4):931
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory