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Gm13827 Pseudogene Detail
Summary
  • Symbol
    Gm13827
  • Name
    predicted gene 13827
  • Feature Type
    pseudogene
  • IDs
    MGI:3651518
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:115191528-115191899 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 55.99 cM
Strain
Comparison
more
  • SNPs within 2kb
    118 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651518
 pseudogene Chr5:115191528-115191899 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013246
 pseudogene Chr5:117873534-117873905 (-)
A/J MGP_AJ_G0013228
 pseudogene Chr5:113207644-113208015 (-)
AKR/J MGP_AKRJ_G0013194
 pseudogene Chr5:116817739-116818110 (-)
BALB/cJ MGP_BALBcJ_G0013209
 pseudogene Chr5:114603672-114604043 (-)
C3H/HeJ MGP_C3HHeJ_G0013057
 pseudogene Chr5:117340266-117340637 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013575
 pseudogene Chr5:122429790-122430161 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0012781
 pseudogene Chr5:116256687-116257039 (-)
CBA/J MGP_CBAJ_G0013026
 pseudogene Chr5:127109608-127110057 (-)
DBA/2J MGP_DBA2J_G0013108
 pseudogene Chr5:113283855-113284226 (-)
FVB/NJ MGP_FVBNJ_G0013107
 pseudogene Chr5:112098463-112098834 (-)
LP/J MGP_LPJ_G0013179
 pseudogene Chr5:118449953-118451946 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013127
 pseudogene Chr5:131465491-131466873 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013577
 pseudogene Chr5:116291085-116291456 (-)
PWK/PhJ MGP_PWKPhJ_G0012594
 pseudogene Chr5:111942192-111942715 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012387
 pseudogene Chr5:113841401-113841733 (-)
WSB/EiJ MGP_WSBEiJ_G0012818
 pseudogene Chr5:116872393-116872764 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm13827
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086167 Ensembl Gene Model | MGI Sequence Detail 372 C57BL/6J ±  kb
transcript ENSMUST00000148801 Ensembl | MGI Sequence Detail 372 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory