Gm12238 MGI Mouse Gene Detail - MGI:3651550

Sequence Map

Chr11:55373532-55373655 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651550	lncRNA gene	Chr11:55373532-55373655 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036892	sense intronic lncRNA gene	Chr11:55020765-55020888 (+)
A/J	MGP_AJ_G0036880	sense intronic lncRNA gene	Chr11:52970506-52970629 (+)
AKR/J	MGP_AKRJ_G0036827	sense intronic lncRNA gene	Chr11:54697968-54698091 (+)
BALB/cJ	MGP_BALBcJ_G0036871	sense intronic lncRNA gene	Chr11:53299351-53299474 (+)
C3H/HeJ	MGP_C3HHeJ_G0036556	sense intronic lncRNA gene	Chr11:54629524-54629647 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037384	sense intronic lncRNA gene	Chr11:56683542-56683665 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034444	sense intronic lncRNA gene	Chr11:50383598-50383721 (+)
CAST/EiJ	MGP_CASTEiJ_G0035745	sense intronic lncRNA gene	Chr11:54671731-54671854 (+)
CBA/J	MGP_CBAJ_G0036531	sense intronic lncRNA gene	Chr11:59383204-59383327 (+)
DBA/2J	MGP_DBA2J_G0036708	sense intronic lncRNA gene	Chr11:52650586-52650709 (+)
FVB/NJ	MGP_FVBNJ_G0036659	sense intronic lncRNA gene	Chr11:52319502-52319625 (+)
LP/J	MGP_LPJ_G0036754	sense intronic lncRNA gene	Chr11:55479553-55479676 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036665	sense intronic lncRNA gene	Chr11:60554567-60554690 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037500	sense intronic lncRNA gene	Chr11:54726343-54726466 (+)
PWK/PhJ	MGP_PWKPhJ_G0035439	sense intronic lncRNA gene	Chr11:53226240-53226363 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035250	sense intronic lncRNA gene	Chr11:54509941-54510064 (+)
WSB/EiJ	MGP_WSBEiJ_G0035945	sense intronic lncRNA gene	Chr11:54360459-54360582 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	100303747	NCBI Gene Model \| MGI Sequence Detail	124	C57BL/6J	± kb
	transcript	NR_028480	RefSeq \| MGI Sequence Detail	124	Not Specified

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Summaries

All 12

Diseases 1

Phenotypes 4
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:155870 Barlow JL, et al., A p53-dependent mechanism underlies macrocytic anemia in a mouse model of human 5q- syndrome. Nat Med. 2010 Jan;16(1):59-66

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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