Gm11295 Pseudogene Detail

Summary

• Symbol
  Gm11295
• Name
  predicted gene 11295

• Feature Type
  pseudogene
• IDs
  MGI:3651595
  NCBI Gene: 665726
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:22466524-22467718 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 8.45 cM

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651595	pseudogene	Chr13:22466511-22467718 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010982	pseudogene	Chr13:19611681-19615971 (+)
A/J	MGP_AJ_G0010986	pseudogene	Chr13:19205176-19206255 (+)
AKR/J	MGP_AKRJ_G0010939	pseudogene	Chr13:19501987-19503584 (+)
BALB/cJ	MGP_BALBcJ_G0010959	pseudogene	Chr13:19201038-19202939 (+)
C3H/HeJ	MGP_C3HHeJ_G0010858	pseudogene	Chr13:19560561-19566563 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011241	pseudogene	Chr13:20309763-20310985 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010831	pseudogene	Chr13:20997223-20998336 (+)
DBA/2J	MGP_DBA2J_G0010878	pseudogene	Chr13:18806289-18807910 (+)
FVB/NJ	MGP_FVBNJ_G0010889	pseudogene	Chr13:18436914-18437933 (+)
LP/J	MGP_LPJ_G0010964	pseudogene	Chr13:19844893-19846788 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010874	pseudogene	Chr13:21347420-21349753 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm11295
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm11295
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000084038 (Evidence)
• NCBI Gene
  665726

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084038	Ensembl Gene Model | MGI Sequence Detail	1195	C57BL/6J
transcript	ENSMUST00000121379	Ensembl | MGI Sequence Detail	803	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14