Gm13453 Pseudogene Detail

Summary

• Symbol
  Gm13453
• Name
  predicted gene 13453

• Feature Type
  pseudogene
• IDs
  MGI:3651618
  NCBI Gene: 100042604
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:40017516-40017872 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 24.51 cM

Strain
Comparison

• SNPs within 2kb
  26 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651618	pseudogene	Chr2:40016920-40017939 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010779	pseudogene	Chr11:77978371-77978674 (-)
A/J	MGP_AJ_G0010777	pseudogene	Chr11:75048889-75049192 (-)
AKR/J	MGP_AKRJ_G0010734	pseudogene	Chr11:77331380-77331683 (-)
BALB/cJ	MGP_BALBcJ_G0010749	pseudogene	Chr11:75429639-75429942 (-)
C3H/HeJ	MGP_C3HHeJ_G0010658	pseudogene	Chr11:77343843-77344146 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011023	pseudogene	Chr11:80437687-80437990 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010483	pseudogene	Chr11:77748755-77749058 (-)
CBA/J	MGP_CBAJ_G0010632	pseudogene	Chr11:83933917-83934220 (-)
DBA/2J	MGP_DBA2J_G0010671	pseudogene	Chr11:74638633-74638936 (-)
FVB/NJ	MGP_FVBNJ_G0010688	pseudogene	Chr11:74201456-74201760 (-)
LP/J	MGP_LPJ_G0010761	pseudogene	Chr11:78583047-78583350 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010662	pseudogene	Chr11:84403317-84403620 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011000	pseudogene	Chr11:77537627-77537930 (-)
PWK/PhJ	MGP_PWKPhJ_G0012979	pseudogene	Chr6:116993132-116993569 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13453
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000083240 (Evidence)
• NCBI Gene
  100042604

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083240	Ensembl Gene Model | MGI Sequence Detail	357	C57BL/6J
transcript	ENSMUST00000118708	Ensembl | MGI Sequence Detail	357	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;