Gm13452 Pseudogene Detail

Summary

• Symbol
  Gm13452
• Name
  predicted gene 13452

• Feature Type
  pseudogene
• IDs
  MGI:3651621
  NCBI Gene: 100417168
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:39464642-39465738 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 24.51 cM

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651621	pseudogene	Chr2:39464642-39465742 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011607	pseudogene	Chr2:38379639-38380735 (+)
A/J	MGP_AJ_G0011605	pseudogene	Chr2:36820485-36821581 (+)
AKR/J	MGP_AKRJ_G0011570	pseudogene	Chr2:38002799-38003895 (+)
BALB/cJ	MGP_BALBcJ_G0011585	pseudogene	Chr2:36893938-36895034 (+)
C3H/HeJ	MGP_C3HHeJ_G0011471	pseudogene	Chr2:37930256-37931352 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011878	pseudogene	Chr2:39471355-39472451 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010406	pseudogene	Chr2:35375544-35376612 (+)
CAST/EiJ	MGP_CASTEiJ_G0011267	pseudogene	Chr2:37886631-37887727 (+)
CBA/J	MGP_CBAJ_G0011442	pseudogene	Chr2:40944304-40945400 (+)
DBA/2J	MGP_DBA2J_G0011499	pseudogene	Chr2:36543483-36544579 (+)
FVB/NJ	MGP_FVBNJ_G0011500	pseudogene	Chr2:36399906-36401002 (+)
LP/J	MGP_LPJ_G0011564	pseudogene	Chr2:38266047-38267143 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011499	pseudogene	Chr2:40526490-40527586 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011869	pseudogene	Chr2:37917825-37918921 (+)
PWK/PhJ	MGP_PWKPhJ_G0011124	pseudogene	Chr2:36461817-36462915 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010944	pseudogene	Chr2:37994792-37995889 (+)
WSB/EiJ	MGP_WSBEiJ_G0011291	pseudogene	Chr2:38077122-38078218 (+)

Homology

• Gene Tree
  Gm13452
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082015 (Evidence)
• NCBI Gene
  100417168

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082015	Ensembl Gene Model | MGI Sequence Detail	1097	C57BL/6J
transcript	ENSMUST00000120896	Ensembl | MGI Sequence Detail	1097	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;