Gm13532 Pseudogene Detail

Summary

• Symbol
  Gm13532
• Name
  predicted gene 13532

• Feature Type
  pseudogene
• IDs
  MGI:3651645
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:57519001-57519240 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 32.18 cM

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651645	pseudogene	Chr2:57519001-57519240 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014106	pseudogene	Chr8:114078029-114078235 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0011413	pseudogene	Chr4:111628268-111628474 (-)
CAST/EiJ	MGP_CASTEiJ_G0012428	pseudogene	Chr4:119083823-119084029 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0014055	pseudogene	Chr8:114243293-114243499 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0012248	pseudogene	Chr4:115116297-115116503 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012058	pseudogene	Chr4:117683261-117683467 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13532
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13532
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  9

• Ensembl
  ENSMUSG00000081642 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081642	Ensembl Gene Model | MGI Sequence Detail	240	C57BL/6J
transcript	ENSMUST00000120373	Ensembl | MGI Sequence Detail	240	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;