Gm13118 Pseudogene Detail

Summary

• Symbol
  Gm13118
• Name
  predicted gene 13118

• Feature Type
  pseudogene
• IDs
  MGI:3651681
  NCBI Gene: 100417902
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:144224970-144225518 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 77.98 cM

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651681	pseudogene	Chr4:144224961-144225616 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011131	pseudogene	Chr14:68723469-68724017 (-)
A/J	MGP_AJ_G0012915	pseudogene	Chr4:141582165-141582713 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0012892	pseudogene	Chr4:142240029-142240577 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013233	pseudogene	Chr4:152889274-152889822 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0012794	pseudogene	Chr4:140945891-140946439 (-)
LP/J	MGP_LPJ_G0011109	pseudogene	Chr14:69853565-69854113 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012805	pseudogene	Chr4:161199151-161199699 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013249	pseudogene	Chr4:146036112-146036660 (-)
PWK/PhJ	MGP_PWKPhJ_G0012311	pseudogene	Chr4:138295504-138296032 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012124	pseudogene	Chr4:141311105-141311633 (-)
WSB/EiJ	MGP_WSBEiJ_G0012520	pseudogene	Chr4:146300798-146301346 (-)

Homology

• Gene Tree
  Gm13118
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13118
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000082835 (Evidence)
• NCBI Gene
  100417902

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082835	Ensembl Gene Model | MGI Sequence Detail	549	C57BL/6J
transcript	ENSMUST00000120402	Ensembl | MGI Sequence Detail	549	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;