Gm11484 Pseudogene Detail

Summary

• Symbol
  Gm11484
• Name
  predicted gene 11484

• Feature Type
  pseudogene
• IDs
  MGI:3651701
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:66272086-66272423 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 34.65 cM

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651701	pseudogene	Chr4:66272086-66272423 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012691	pseudogene	Chr4:65461585-65461922 (+)
A/J	MGP_AJ_G0012677	pseudogene	Chr4:63134504-63134841 (+)
AKR/J	MGP_AKRJ_G0012649	pseudogene	Chr4:64789364-64789701 (+)
BALB/cJ	MGP_BALBcJ_G0012660	pseudogene	Chr4:63317245-63317582 (+)
C3H/HeJ	MGP_C3HHeJ_G0012520	pseudogene	Chr4:65390905-65391242 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012988	pseudogene	Chr4:67705972-67706309 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011292	pseudogene	Chr4:60286289-60286828 (+)
CAST/EiJ	MGP_CASTEiJ_G0012276	pseudogene	Chr4:63335378-63335715 (+)
CBA/J	MGP_CBAJ_G0012497	pseudogene	Chr4:70033247-70033584 (+)
DBA/2J	MGP_DBA2J_G0012558	pseudogene	Chr4:62939215-62939552 (+)
FVB/NJ	MGP_FVBNJ_G0012559	pseudogene	Chr4:62167037-62167374 (+)
LP/J	MGP_LPJ_G0012630	pseudogene	Chr4:65736618-65736955 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012567	pseudogene	Chr4:73200592-73200929 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012993	pseudogene	Chr4:64945616-64945953 (+)
PWK/PhJ	MGP_PWKPhJ_G0012102	pseudogene	Chr4:61479043-61479380 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011916	pseudogene	Chr4:62445356-62445693 (+)
WSB/EiJ	MGP_WSBEiJ_G0012298	pseudogene	Chr4:65012513-65012850 (+)

Homology

• Gene Tree
  Gm11484
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083080 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083080	Ensembl Gene Model | MGI Sequence Detail	338	C57BL/6J
transcript	ENSMUST00000119808	Ensembl | MGI Sequence Detail	338	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;