Gm12656 Pseudogene Detail

Summary

• Symbol
  Gm12656
• Name
  predicted gene 12656

• Feature Type
  pseudogene
• IDs
  MGI:3651715
  NCBI Gene: 100418440
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:94385226-94385793 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 43.32 cM

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651715	pseudogene	Chr4:94385226-94385845 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012769	pseudogene	Chr4:94552866-94553442 (+)
A/J	MGP_AJ_G0012755	pseudogene	Chr4:91240183-91240759 (+)
AKR/J	MGP_AKRJ_G0012727	pseudogene	Chr4:93402641-93403217 (+)
BALB/cJ	MGP_BALBcJ_G0012736	pseudogene	Chr4:91488969-91489545 (+)
C3H/HeJ	MGP_C3HHeJ_G0012595	pseudogene	Chr4:94243532-94244108 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013067	pseudogene	Chr4:98158542-98159118 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011349	pseudogene	Chr4:86771387-86771962 (+)
CAST/EiJ	MGP_CASTEiJ_G0012348	pseudogene	Chr4:92113139-92113715 (+)
CBA/J	MGP_CBAJ_G0012571	pseudogene	Chr4:101149271-101149847 (+)
DBA/2J	MGP_DBA2J_G0012633	pseudogene	Chr4:91020398-91020974 (+)
FVB/NJ	MGP_FVBNJ_G0012636	pseudogene	Chr4:89879665-89880241 (+)
LP/J	MGP_LPJ_G0012706	pseudogene	Chr4:94872645-94873221 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012645	pseudogene	Chr4:106905879-106906455 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013074	pseudogene	Chr4:93694083-93694659 (+)
PWK/PhJ	MGP_PWKPhJ_G0012170	pseudogene	Chr4:89178624-89179201 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011979	pseudogene	Chr4:91113393-91113966 (+)
WSB/EiJ	MGP_WSBEiJ_G0012374	pseudogene	Chr4:93856141-93856717 (+)

Homology

• Gene Tree
  Gm12656
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12656
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083359 (Evidence)
• NCBI Gene
  100418440

Representative Sequences			Length	Strain/Species
genomic	100418440	NCBI Gene Model | MGI Sequence Detail	568	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;