Gm12175 Pseudogene Detail

Summary

• Symbol
  Gm12175
• Name
  predicted gene 12175

• Feature Type
  pseudogene
• IDs
  MGI:3651718
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:46765240-46765584 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 28.09 cM

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651718	pseudogene	Chr11:46765240-46765584 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010686	pseudogene	Chr11:45835739-45836083 (+)
A/J	MGP_AJ_G0010681	pseudogene	Chr11:44041871-44042215 (+)
AKR/J	MGP_AKRJ_G0010642	pseudogene	Chr11:45357405-45357749 (+)
BALB/cJ	MGP_BALBcJ_G0010656	pseudogene	Chr11:44199834-44200178 (+)
C3H/HeJ	MGP_C3HHeJ_G0010572	pseudogene	Chr11:45387137-45387481 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010933	pseudogene	Chr11:47195625-47195969 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010396	pseudogene	Chr11:45532911-45533256 (+)
CBA/J	MGP_CBAJ_G0010545	pseudogene	Chr11:49396332-49396676 (+)
DBA/2J	MGP_DBA2J_G0010582	pseudogene	Chr11:43823796-43824140 (+)
FVB/NJ	MGP_FVBNJ_G0010595	pseudogene	Chr11:43476357-43476701 (+)
LP/J	MGP_LPJ_G0010668	pseudogene	Chr11:46087235-46087579 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010570	pseudogene	Chr11:50910694-50911038 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010906	pseudogene	Chr11:45497076-45497420 (+)
PWK/PhJ	MGP_PWKPhJ_G0010290	pseudogene	Chr11:43926889-43927233 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010100	pseudogene	Chr11:45318337-45318683 (+)
WSB/EiJ	MGP_WSBEiJ_G0010456	pseudogene	Chr11:45176635-45176979 (+)

Homology

• Gene Tree
  Gm12175
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12175
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000082818 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082818	Ensembl Gene Model | MGI Sequence Detail	345	C57BL/6J
transcript	ENSMUST00000122081	Ensembl | MGI Sequence Detail	345	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6