Gm11417 MGI Mouse Gene Detail - MGI:3651779

Sequence Map

Chr11:80963229-80974184 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651779	lncRNA gene	Chr11:80963229-80974184 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003020	antisense lncRNA gene	Chr11:82267704-82278653 (+)
A/J	MGP_AJ_G0002997	antisense lncRNA gene	Chr11:79115647-79126622 (+)
AKR/J	MGP_AKRJ_G0002978	antisense lncRNA gene	Chr11:81453711-81464733 (+)
BALB/cJ	MGP_BALBcJ_G0002984	antisense lncRNA gene	Chr11:79509015-79519948 (+)
C3H/HeJ	MGP_C3HHeJ_G0002940	antisense lncRNA gene	Chr11:81541115-81552075 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003126	antisense lncRNA gene	Chr11:84772087-84783046 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002665	antisense lncRNA gene	Chr11:76039969-76050886 (+)
CAST/EiJ	MGP_CASTEiJ_G0002910	antisense lncRNA gene	Chr11:82038231-82049247 (+)
CBA/J	MGP_CBAJ_G0002937	antisense lncRNA gene	Chr11:88495204-88506154 (+)
DBA/2J	MGP_DBA2J_G0002943	antisense lncRNA gene	Chr11:78667169-78678177 (+)
FVB/NJ	MGP_FVBNJ_G0002962	antisense lncRNA gene	Chr11:78229448-78240329 (+)
LP/J	MGP_LPJ_G0003019	antisense lncRNA gene	Chr11:82798508-82809468 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002950	antisense lncRNA gene	Chr11:88740530-88751460 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003130	antisense lncRNA gene	Chr11:81748639-81759590 (+)
PWK/PhJ	MGP_PWKPhJ_G0002869	antisense lncRNA gene	Chr11:79487134-79498101 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002814	antisense lncRNA gene	Chr11:81363759-81376828 (+)
WSB/EiJ	MGP_WSBEiJ_G0002940	antisense lncRNA gene	Chr11:81595924-81606804 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085130	Ensembl Gene Model \| MGI Sequence Detail	10956	C57BL/6J	± kb
	transcript	ENSMUST00000150536	Ensembl \| MGI Sequence Detail	920	Not Applicable

Summaries

All 12

Phenotypes 8
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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