Rpl36-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl36-ps1
• Name
  ribosomal protein L36, pseudogene 1
• Synonyms
  Gm11740

• Feature Type
  pseudogene
• IDs
  MGI:3651798
  NCBI Gene: 629971
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:116395362-116395664 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 81.38 cM

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651798	pseudogene	Chr11:116395334-116395691 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010882	pseudogene	Chr11:120635008-120635310 (+)
A/J	MGP_AJ_G0010880	pseudogene	Chr11:115352142-115352444 (+)
AKR/J	MGP_AKRJ_G0010840	pseudogene	Chr11:118790619-118790921 (+)
BALB/cJ	MGP_BALBcJ_G0010857	pseudogene	Chr11:115755206-115755508 (+)
C3H/HeJ	MGP_C3HHeJ_G0010759	pseudogene	Chr11:119143879-119144181 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011130	pseudogene	Chr11:124318937-124319239 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009737	pseudogene	Chr11:112356188-112356469 (+)
CAST/EiJ	MGP_CASTEiJ_G0010584	pseudogene	Chr11:120514833-120515139 (+)
CBA/J	MGP_CBAJ_G0010730	pseudogene	Chr11:129238485-129238787 (+)
DBA/2J	MGP_DBA2J_G0010777	pseudogene	Chr11:114782242-114782544 (+)
FVB/NJ	MGP_FVBNJ_G0010793	pseudogene	Chr11:114288059-114288361 (+)
LP/J	MGP_LPJ_G0010865	pseudogene	Chr11:121017114-121017416 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010770	pseudogene	Chr11:128283303-128283605 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011109	pseudogene	Chr11:119454022-119454324 (+)
PWK/PhJ	MGP_PWKPhJ_G0010473	pseudogene	Chr11:116105053-116105355 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010289	pseudogene	Chr11:119199098-119199400 (+)
WSB/EiJ	MGP_WSBEiJ_G0010635	pseudogene	Chr11:119419630-119419932 (+)

Homology

• Gene Tree
  Rpl36-ps1
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081318 (Evidence)
• NCBI Gene
  629971

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081318	Ensembl Gene Model | MGI Sequence Detail	303	C57BL/6J
transcript	ENSMUST00000119508	Ensembl | MGI Sequence Detail	303	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;