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Eif1-ps3 Pseudogene Detail
Summary
  • Symbol
    Eif1-ps3
  • Name
    eukaryotic translation initiation factor 1, pseudogene 3
  • Synonyms
    Eif1-ps, Gm13637
Location &
Maps
more
  • Sequence Map
    Chr2:72400825-72401166 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 43.35 cM
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651806
 pseudogene Chr2:72400795-72401166 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011694
 pseudogene Chr2:72763691-72764032 (-)
A/J MGP_AJ_G0011690
 pseudogene Chr2:69906470-69906811 (-)
AKR/J MGP_AKRJ_G0011656
 pseudogene Chr2:71848110-71848451 (-)
BALB/cJ MGP_BALBcJ_G0011671
 pseudogene Chr2:70119388-70119729 (-)
C3H/HeJ MGP_C3HHeJ_G0011557
 pseudogene Chr2:72037110-72037451 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011965
 pseudogene Chr2:74948166-74948507 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0010477
 pseudogene Chr2:67151547-67151845 (-)
CAST/EiJ MGP_CASTEiJ_G0011345
 pseudogene Chr2:72251380-72251721 (-)
CBA/J MGP_CBAJ_G0011530
 pseudogene Chr2:77688693-77689034 (-)
DBA/2J MGP_DBA2J_G0011582
 pseudogene Chr2:69535704-69536045 (-)
FVB/NJ MGP_FVBNJ_G0011587
 pseudogene Chr2:68946894-68947235 (-)
LP/J MGP_LPJ_G0011650
 pseudogene Chr2:72651355-72651696 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011587
 pseudogene Chr2:79636912-79637253 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011958
 pseudogene Chr2:71921051-71921392 (-)
PWK/PhJ MGP_PWKPhJ_G0011202
 pseudogene Chr2:69423760-69424101 (-)
SPRET/EiJ MGP_SPRETEiJ_G0011025
 pseudogene Chr2:72134205-72134546 (-)
WSB/EiJ MGP_WSBEiJ_G0011373
 pseudogene Chr2:72375826-72376167 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080865 Ensembl Gene Model | MGI Sequence Detail 342 C57BL/6J ±  kb
transcript ENSMUST00000121450 Ensembl | MGI Sequence Detail 342 Not Applicable  
polypeptide XP_036018680 RefSeq | MGI Sequence Detail 123 C57BL/6J  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 19
    Phenotypes 13
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:239094 Schep R, et al., Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape. Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7720-E7729
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory