Gm14188 Pseudogene Detail

Summary

• Symbol
  Gm14188
• Name
  predicted gene 14188

• Feature Type
  pseudogene
• IDs
  MGI:3651817
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:99654759-99654926 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 63.11 cM

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651817	pseudogene	Chr11:99654759-99654926 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010838	pseudogene	Chr11:102459876-102460043 (-)
A/J	MGP_AJ_G0010836	pseudogene	Chr11:98138316-98138483 (-)
AKR/J	MGP_AKRJ_G0010795	pseudogene	Chr11:101176233-101176400 (-)
BALB/cJ	MGP_BALBcJ_G0010811	pseudogene	Chr11:98666585-98666752 (-)
C3H/HeJ	MGP_C3HHeJ_G0010715	pseudogene	Chr11:101347229-101347396 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011083	pseudogene	Chr11:105596880-105597047 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009699	pseudogene	Chr11:95658808-95658975 (-)
CAST/EiJ	MGP_CASTEiJ_G0010540	pseudogene	Chr11:102368018-102368185 (-)
CBA/J	MGP_CBAJ_G0010685	pseudogene	Chr11:110004994-110005161 (-)
DBA/2J	MGP_DBA2J_G0010730	pseudogene	Chr11:97717846-97718013 (-)
FVB/NJ	MGP_FVBNJ_G0010750	pseudogene	Chr11:97211151-97211318 (-)
LP/J	MGP_LPJ_G0010820	pseudogene	Chr11:102971761-102971928 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010725	pseudogene	Chr11:109653545-109653712 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011062	pseudogene	Chr11:101552598-101552765 (-)
PWK/PhJ	MGP_PWKPhJ_G0010429	pseudogene	Chr11:98785888-98786055 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010247	pseudogene	Chr11:101258880-101259047 (-)
WSB/EiJ	MGP_WSBEiJ_G0010590	pseudogene	Chr11:101517721-101517888 (-)

Homology

• Gene Tree
  Gm14188
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000078263 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000078263	Ensembl Gene Model | MGI Sequence Detail	168	C57BL/6J
transcript	ENSMUST00000105060	Ensembl | MGI Sequence Detail	168	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm14188:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr110710	Chr11:99654979-99654983 (-)	-55 bp