Gm11371 Pseudogene Detail

Summary

• Symbol
  Gm11371
• Name
  predicted gene 11371

• Feature Type
  pseudogene
• IDs
  MGI:3651829
  NCBI Gene: 100041257
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:31193160-31194345 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.34 cM

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651829	pseudogene	Chr13:31193160-31194345 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011010	pseudogene	Chr13:28904446-28904986 (+)
A/J	MGP_AJ_G0011014	pseudogene	Chr13:28158155-28158778 (+)
AKR/J	MGP_AKRJ_G0010968	pseudogene	Chr13:28762279-28767397 (+)
BALB/cJ	MGP_BALBcJ_G0010988	pseudogene	Chr13:28238978-28239659 (+)
C3H/HeJ	MGP_C3HHeJ_G0010887	pseudogene	Chr13:28781528-28784156 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011269	pseudogene	Chr13:29888031-29893116 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009856	pseudogene	Chr13:26550137-26550678 (+)
CAST/EiJ	MGP_CASTEiJ_G0010709	pseudogene	Chr13:28427992-28428532 (+)
CBA/J	MGP_CBAJ_G0010860	pseudogene	Chr13:31169858-31170544 (+)
DBA/2J	MGP_DBA2J_G0010905	pseudogene	Chr13:27685036-27685867 (+)
FVB/NJ	MGP_FVBNJ_G0010916	pseudogene	Chr13:27288339-27289239 (+)
LP/J	MGP_LPJ_G0010993	pseudogene	Chr13:29144171-29144832 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010902	pseudogene	Chr13:31300542-31303856 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011248	pseudogene	Chr13:28414549-28417967 (+)
PWK/PhJ	MGP_PWKPhJ_G0010593	pseudogene	Chr13:27843220-27843760 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010413	pseudogene	Chr13:27322234-27322774 (+)
WSB/EiJ	MGP_WSBEiJ_G0010757	pseudogene	Chr13:28721374-28723135 (+)

Homology

• Gene Tree
  Gm11371
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11371
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082014 (Evidence)
• NCBI Gene
  100041257

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082014	Ensembl Gene Model | MGI Sequence Detail	1186	C57BL/6J
transcript	ENSMUST00000120294	Ensembl | MGI Sequence Detail	385	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69