Gm11370 Pseudogene Detail

Summary

• Symbol
  Gm11370
• Name
  predicted gene 11370

• Feature Type
  pseudogene
• IDs
  MGI:3651832
  NCBI Gene: 666443
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:30915760-30916019 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.28 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651832	pseudogene	Chr13:30915760-30916019 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011009	pseudogene	Chr13:28600273-28600532 (+)
A/J	MGP_AJ_G0011013	pseudogene	Chr13:27875016-27875275 (+)
AKR/J	MGP_AKRJ_G0010967	pseudogene	Chr13:28478822-28479081 (+)
BALB/cJ	MGP_BALBcJ_G0010987	pseudogene	Chr13:27958408-27958667 (+)
C3H/HeJ	MGP_C3HHeJ_G0010886	pseudogene	Chr13:28491646-28491905 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011268	pseudogene	Chr13:29597180-29597439 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009855	pseudogene	Chr13:26273348-26273605 (+)
CAST/EiJ	MGP_CASTEiJ_G0010708	pseudogene	Chr13:28144850-28145109 (+)
CBA/J	MGP_CBAJ_G0010859	pseudogene	Chr13:30847203-30847462 (+)
DBA/2J	MGP_DBA2J_G0010904	pseudogene	Chr13:27408696-27408955 (+)
FVB/NJ	MGP_FVBNJ_G0010915	pseudogene	Chr13:27012096-27012355 (+)
LP/J	MGP_LPJ_G0010992	pseudogene	Chr13:28858669-28858928 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010901	pseudogene	Chr13:31004540-31004799 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011247	pseudogene	Chr13:28117806-28118065 (+)
PWK/PhJ	MGP_PWKPhJ_G0010592	pseudogene	Chr13:27561639-27561898 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010412	pseudogene	Chr13:27027004-27027263 (+)
WSB/EiJ	MGP_WSBEiJ_G0010756	pseudogene	Chr13:28426907-28427166 (+)

Homology

• Gene Tree
  Gm11370
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11370
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081905 (Evidence)
• NCBI Gene
  666443

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081905	Ensembl Gene Model | MGI Sequence Detail	260	C57BL/6J
transcript	ENSMUST00000120583	Ensembl | MGI Sequence Detail	260	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm11370:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119092	Chr13:30915732-30915740 (+)	-24 bp