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H2ac5-ps Pseudogene Detail
Summary
  • Symbol
    H2ac5-ps
  • Name
    H2A clustered histone 5, pseudogene
  • Synonyms
    Gm11336
  • Feature Type
    pseudogene
  • IDs
    MGI:3651860
    NCBI Gene: 115488175
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:23930149-23930482 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 9.90 cM
Strain
Comparison
more
  • SNPs within 2kb
    203 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651860
 pseudogene Chr13:23930088-23930497 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040047
 pseudogene Chr13:21188303-21189397 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040613
 pseudogene Chr13:21968831-21969164 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037136
 pseudogene Chr13:19573826-19574119 (-)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0039811
 pseudogene Chr13:19977279-19977612 (-)
LP/J MGP_LPJ_G0039884
 pseudogene Chr13:21497669-21498351 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039798
 pseudogene Chr13:23115638-23115971 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040707
 pseudogene Chr13:20903887-20905112 (-)
PWK/PhJ MGP_PWKPhJ_G0038468
 pseudogene Chr13:20354876-20355735 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0039006
 pseudogene Chr13:21042891-21043224 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    15
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080999 Ensembl Gene Model | MGI Sequence Detail 334 C57BL/6J ±  kb
transcript ENSMUST00000118168 Ensembl | MGI Sequence Detail 334 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:6330719
References
more
  • Summaries
    All 9
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory