Gm13457 Pseudogene Detail

Summary

• Symbol
  Gm13457
• Name
  predicted gene 13457

• Feature Type
  pseudogene
• IDs
  MGI:3651864
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:40067034-40067467 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 24.51 cM

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651864	pseudogene	Chr2:40067034-40067467 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011609	pseudogene	Chr2:39007938-39008460 (+)
A/J	MGP_AJ_G0011607	pseudogene	Chr2:37445733-37446166 (+)
AKR/J	MGP_AKRJ_G0011572	pseudogene	Chr2:38613946-38614381 (+)
BALB/cJ	MGP_BALBcJ_G0011587	pseudogene	Chr2:37498703-37499136 (+)
C3H/HeJ	MGP_C3HHeJ_G0011473	pseudogene	Chr2:38553299-38553761 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011880	pseudogene	Chr2:40123376-40123809 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010408	pseudogene	Chr2:35920135-35920595 (+)
CAST/EiJ	MGP_CASTEiJ_G0011269	pseudogene	Chr2:38468228-38470194 (+)
CBA/J	MGP_CBAJ_G0011444	pseudogene	Chr2:41622295-41622730 (+)
DBA/2J	MGP_DBA2J_G0011501	pseudogene	Chr2:37138118-37138550 (+)
FVB/NJ	MGP_FVBNJ_G0011502	pseudogene	Chr2:37021267-37021699 (+)
LP/J	MGP_LPJ_G0011566	pseudogene	Chr2:38882599-38883980 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011501	pseudogene	Chr2:41169009-41169443 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011871	pseudogene	Chr2:38481986-38482420 (+)
PWK/PhJ	MGP_PWKPhJ_G0011126	pseudogene	Chr2:37040500-37040953 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010946	pseudogene	Chr2:38529151-38529599 (+)
WSB/EiJ	MGP_WSBEiJ_G0011293	pseudogene	Chr2:38644598-38645031 (+)

Homology

• Gene Tree
  Gm13457
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084171 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084171	Ensembl Gene Model | MGI Sequence Detail	434	C57BL/6J
transcript	ENSMUST00000117885	Ensembl | MGI Sequence Detail	267	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;