Gm11279 Pseudogene Detail

Summary

• Symbol
  Gm11279
• Name
  predicted gene 11279

• Feature Type
  pseudogene
• IDs
  MGI:3651909
  NCBI Gene: 100418364
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:22087999-22088932 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 8.05 cM

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651909	pseudogene	Chr13:22087326-22088954 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010977	pseudogene	Chr13:19211761-19213389 (+)
A/J	MGP_AJ_G0010982	pseudogene	Chr13:18770127-18773179 (+)
AKR/J	MGP_AKRJ_G0010935	pseudogene	Chr13:19104513-19106141 (+)
BALB/cJ	MGP_BALBcJ_G0010955	pseudogene	Chr13:18825364-18826992 (+)
C3H/HeJ	MGP_C3HHeJ_G0010854	pseudogene	Chr13:19196892-19198520 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011237	pseudogene	Chr13:19897020-19899814 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009829	pseudogene	Chr13:17067505-17069124 (+)
CAST/EiJ	MGP_CASTEiJ_G0010681	pseudogene	Chr13:18993059-18994687 (+)
CBA/J	MGP_CBAJ_G0010826	pseudogene	Chr13:20551588-20553216 (+)
DBA/2J	MGP_DBA2J_G0010873	pseudogene	Chr13:18415128-18416756 (+)
FVB/NJ	MGP_FVBNJ_G0010885	pseudogene	Chr13:18070585-18072213 (+)
LP/J	MGP_LPJ_G0010960	pseudogene	Chr13:19432993-19434654 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010870	pseudogene	Chr13:20953614-20955936 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011216	pseudogene	Chr13:18901198-18902826 (+)
PWK/PhJ	MGP_PWKPhJ_G0010565	pseudogene	Chr13:18433357-18435143 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010385	pseudogene	Chr13:17889317-17890949 (+)
WSB/EiJ	MGP_WSBEiJ_G0010728	pseudogene	Chr13:19021894-19023522 (+)

Homology

• Gene Tree
  Gm11279
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11279
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081576 (Evidence)
• NCBI Gene
  100418364

Representative Sequences			Length	Strain/Species
genomic	100418364	NCBI Gene Model | MGI Sequence Detail	934	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69