Gm11260 Pseudogene Detail

Summary

• Symbol
  Gm11260
• Name
  predicted gene 11260

• Feature Type
  pseudogene
• IDs
  MGI:3651928
  NCBI Gene: 100039996
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:78152238-78153003 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 37.35 cM

Strain
Comparison

• SNPs within 2kb
  246 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651928	pseudogene	Chr4:78152223-78153164 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012726	pseudogene	Chr4:77671282-77672207 (+)
A/J	MGP_AJ_G0012712	pseudogene	Chr4:75006390-75007315 (+)
AKR/J	MGP_AKRJ_G0012684	pseudogene	Chr4:76878938-76879879 (+)
BALB/cJ	MGP_BALBcJ_G0012695	pseudogene	Chr4:75157313-75158238 (+)
C3H/HeJ	MGP_C3HHeJ_G0012554	pseudogene	Chr4:77501725-77502666 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013024	pseudogene	Chr4:80716177-80717118 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011318	pseudogene	Chr4:71237839-71238803 (+)
CAST/EiJ	MGP_CASTEiJ_G0012309	pseudogene	Chr4:75488626-75489567 (+)
CBA/J	MGP_CBAJ_G0012531	pseudogene	Chr4:83193499-83194440 (+)
DBA/2J	MGP_DBA2J_G0012591	pseudogene	Chr4:74741645-74742586 (+)
FVB/NJ	MGP_FVBNJ_G0012594	pseudogene	Chr4:73810221-73811162 (+)
LP/J	MGP_LPJ_G0012664	pseudogene	Chr4:78044875-78045800 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012603	pseudogene	Chr4:87704096-87705037 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013029	pseudogene	Chr4:77009596-77010537 (+)
PWK/PhJ	MGP_PWKPhJ_G0012134	pseudogene	Chr4:73182124-73183049 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011947	pseudogene	Chr4:74503032-74509173 (+)
WSB/EiJ	MGP_WSBEiJ_G0012333	pseudogene	Chr4:77127765-77128706 (+)

Homology

• Gene Tree
  Gm11260
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm11260
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082351 (Evidence)
• NCBI Gene
  100039996

Representative Sequences			Length	Strain/Species
genomic	100039996	NCBI Gene Model | MGI Sequence Detail	766	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;