Gm12187 Pseudogene Detail

Summary

• Symbol
  Gm12187
• Name
  predicted gene 12187

• Feature Type
  pseudogene
• IDs
  MGI:3651944
  NCBI Gene: 100502678
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:48960523-48961897 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 29.07 cM

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651944	pseudogene	Chr11:48960306-48961919 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039964	pseudogene	Chr11:47959631-48124372 (-)
A/J	MGP_AJ_G0039972	pseudogene	Chr11:46224229-46274752 (-)
AKR/J	MGP_AKRJ_G0039891	pseudogene	Chr11:47613541-47614919 (-)
BALB/cJ	MGP_BALBcJ_G0039949	pseudogene	Chr11:46405057-46520207 (-)
C3H/HeJ	MGP_C3HHeJ_G0039596	pseudogene	Chr11:47691515-47695487 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0037085	pseudogene	Chr11:43980365-43981728 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039565	pseudogene	Chr11:51888158-51889614 (-)
DBA/2J	MGP_DBA2J_G0039762	pseudogene	Chr11:46131493-46132770 (-)
FVB/NJ	MGP_FVBNJ_G0039727	pseudogene	Chr11:45466484-45727539 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039712	pseudogene	Chr11:53345278-53396224 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0038382	pseudogene	Chr11:46324204-46325576 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038113	pseudogene	Chr11:47373677-47375053 (-)
WSB/EiJ	MGP_WSBEiJ_G0038925	pseudogene	Chr11:47436132-47437391 (-)

Homology

• Gene Tree
  Gm12187
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12187
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000083178 (Evidence)
• NCBI Gene
  100502678

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083178	Ensembl Gene Model | MGI Sequence Detail	1375	C57BL/6J
transcript	ENSMUST00000119584	Ensembl | MGI Sequence Detail	1375	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6