Gm13563 MGI Mouse Gene Detail - MGI:3652052

Sequence Map

Chr2:26271538-26279030 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652052	lncRNA gene	Chr2:26271538-26279030 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003526	antisense lncRNA gene	Chr2:24330863-24338355 (+)
A/J	MGP_AJ_G0003506	antisense lncRNA gene	Chr2:23398839-23406331 (+)
AKR/J	MGP_AKRJ_G0003485	antisense lncRNA gene	Chr2:24160654-24168146 (+)
BALB/cJ	MGP_BALBcJ_G0003495	antisense lncRNA gene	Chr2:23507513-23515005 (+)
C3H/HeJ	MGP_C3HHeJ_G0003443	antisense lncRNA gene	Chr2:24120275-24127767 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003633	antisense lncRNA gene	Chr2:25114571-25122063 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003143	antisense lncRNA gene	Chr2:22277324-22285204 (+)
CAST/EiJ	MGP_CASTEiJ_G0003406	antisense lncRNA gene	Chr2:23992040-23999528 (+)
CBA/J	MGP_CBAJ_G0003440	antisense lncRNA gene	Chr2:25965751-25973243 (+)
DBA/2J	MGP_DBA2J_G0003448	antisense lncRNA gene	Chr2:23220372-23227864 (+)
FVB/NJ	MGP_FVBNJ_G0003467	antisense lncRNA gene	Chr2:22972027-22979519 (+)
LP/J	MGP_LPJ_G0003521	antisense lncRNA gene	Chr2:24275824-24283316 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003455	antisense lncRNA gene	Chr2:26115094-26125398 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003636	antisense lncRNA gene	Chr2:24118869-24126361 (+)
PWK/PhJ	MGP_PWKPhJ_G0003362	antisense lncRNA gene	Chr2:23023365-23031021 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003307	antisense lncRNA gene	Chr2:24252472-24259916 (+)
WSB/EiJ	MGP_WSBEiJ_G0003441	antisense lncRNA gene	Chr2:24225527-24233019 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085767	Ensembl Gene Model \| MGI Sequence Detail	7493	C57BL/6J	± kb
	transcript	ENSMUST00000150375	Ensembl \| MGI Sequence Detail	851	Not Applicable

Summaries

All 6

Phenotypes 2
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm13563:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16791	Chr2:26270708-26270747 (+)	-810 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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