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Krtap2-20 Gene Detail
Summary
  • Symbol
    Krtap2-20
  • Name
    keratin associated protein 2-20
  • Synonyms
    Gm11562
  • Feature Type
    protein coding gene
  • IDs
    MGI:3652059
    NCBI Gene: 100502803
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99510424-99511230 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 62.96 cM
Strain
Comparison
more
  • SNPs within 2kb
    137 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652059
 protein coding gene Chr11:99510424-99511261 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0019073
 protein coding gene Chr11:97984837-97986755 (-)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0018416
 protein coding gene Chr11:102176729-102179519 (-)
CBA/J MGP_CBAJ_G0018832
 protein coding gene Chr11:109819429-109820129 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0018929
 protein coding gene Chr11:97054877-97055577 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0018956
 protein coding gene Chr11:109484323-109485023 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0018464
 protein coding gene Chr11:101352278-101352978 (-)



Homology
more
  • Human Ortholog
    KRTAP2-1, keratin associated protein 2-1
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP2-1, keratin associated protein 2-1
  • Synonyms
    KAP2.1A, KRTAP2.1A
  • Links
    NCBI Gene ID: 81872
    neXtProt AC: NX_Q9BYU5
    UniProt: Q9BYU5

  • Chr Location
    17q21.2; chr17:41046541-41047316 (-)  GRCh38
  • Human Ortholog
    KRTAP2-2, keratin associated protein 2-2
  • Synonyms
    KAP2.1, KAP2.2, KRTAP2-1, KRTAP2.1A, KRTAP2.1B
  • Links
    NCBI Gene ID: 728279
    neXtProt AC: NX_Q9BYT5, NX_Q9BYU5

  • Chr Location
    17q21.2; chr17:41054498-41055230 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100502803 NCBI Gene Model | MGI Sequence Detail 807 C57BL/6J ±  kb
transcript NM_001177537 RefSeq | MGI Sequence Detail 807 C57BL/6  
polypeptide NP_001171008 RefSeq | MGI Sequence Detail 136 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002494 Keratin-associated protein
    IPR052154 Keratin-associated protein type 2
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 3
Other
Accession IDs
less
MGI:7580724
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:230728 Kumar V, et al., A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. J Cell Biol. 2015 Dec 7;211(5):1057-75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory