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Krtap9-20 Gene Detail
Summary
  • Symbol
    Krtap9-20
  • Name
    keratin associated protein 9-20
  • Synonyms
    Gm11559
  • Feature Type
    protein coding gene
  • IDs
    MGI:3652067
    NCBI Gene: 100415785
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99755302-99756397 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 63.21 cM
Strain
Comparison
more
  • SNPs within 2kb
    147 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652067
 protein coding gene Chr11:99755302-99756397 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019125
 protein coding gene Chr11:102578224-102579330 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0019067
 protein coding gene Chr11:98783226-98784153 (+)
C3H/HeJ MGP_C3HHeJ_G0018877
 protein coding gene Chr11:101484149-101485244 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019516
 protein coding gene Chr11:105704124-105704949 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017145
 protein coding gene Chr11:95738313-95739465 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0018958
 protein coding gene Chr11:97816430-97818823 (+)
FVB/NJ MGP_FVBNJ_G0018947
 protein coding gene Chr11:97332216-97333185 (+)
LP/J MGP_LPJ_G0019027
 protein coding gene Chr11:103080600-103082363 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018977
 protein coding gene Chr11:109790403-109792211 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0017987
 protein coding gene Chr11:101379563-101380594 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    KRTAP9-2, keratin associated protein 9-2
  • Vertebrate Orthologs
    8
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP9-2, keratin associated protein 9-2
  • Synonyms
    KAP9.2, KRTAP9.2
  • Links
    NCBI Gene ID: 83899
    neXtProt AC: NX_Q9BYQ4
    UniProt: Q9BYQ4

  • Chr Location
    17q21.2; chr17:41226648-41227652 (+)  GRCh38
  • Human Ortholog
    KRTAP9-3, keratin associated protein 9-3
  • Synonyms
    KAP9.3, KRTAP9.3
  • Links
    NCBI Gene ID: 83900
    neXtProt AC: NX_Q9BYQ3
    UniProt: Q9BYQ3

  • Chr Location
    17q21.2; chr17:41232449-41233454 (+)  GRCh38
  • Human Ortholog
    KRTAP9-4, keratin associated protein 9-4
  • Synonyms
    KAP9.4, KRTAP9.4
  • Links
    NCBI Gene ID: 85280
    neXtProt AC: NX_Q9BYQ2
    UniProt: Q9BYQ2

  • Chr Location
    17q21.2; chr17:41249687-41250653 (+)  GRCh38
  • Human Ortholog
    KRTAP9-6, keratin associated protein 9-6
  • Synonyms
    KAP9.6, KRTAP9.6, KRTAP9L2
  • Links
    NCBI Gene ID: 100507608
    neXtProt AC: NX_A8MVA2
    UniProt: A8MVA2

  • Chr Location
    17
  • Human Ortholog
    KRTAP9-7, keratin associated protein 9-7
  • Synonyms
    KAP9.7, KRTAP9L1
  • Links
    NCBI Gene ID: 100505724
    neXtProt AC: NX_A8MTY7
    UniProt: A8MTY7

  • Chr Location
    chr17:41275698-41276207 (+)  GRCh38
  • Human Ortholog
    KRTAP9-8, keratin associated protein 9-8
  • Synonyms
    KAP9.8, KRTAP9.8
  • Links
    NCBI Gene ID: 83901
    neXtProt AC: NX_Q9BYQ0
    UniProt: Q9BYQ0

  • Chr Location
    17q21.2; chr17:41237999-41239004 (+)  GRCh38
  • Human Ortholog
    KRTAP9-9, keratin associated protein 9-9
  • Synonyms
    KAP9.5, KAP9.9, KRTAP9-5, KRTAP9.9
  • Links
    NCBI Gene ID: 81870
    neXtProt AC: NX_Q9BYP9
    UniProt: Q9BYP9

  • Chr Location
    17q21.2; chr17:41255384-41256364 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 100415785 NCBI Gene Model | MGI Sequence Detail 1096 C57BL/6J ±  kb
transcript NM_001177484 RefSeq | MGI Sequence Detail 1096 C57BL/6  
polypeptide NP_001170955 RefSeq | MGI Sequence Detail 191 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002494 Keratin-associated protein
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
Other
Accession IDs
less
MGI:7580911
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:230728 Kumar V, et al., A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. J Cell Biol. 2015 Dec 7;211(5):1057-75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory