Gm12748 Pseudogene Detail

Summary

• Symbol
  Gm12748
• Name
  predicted gene 12748

• Feature Type
  pseudogene
• IDs
  MGI:3652128
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:63710627-63711130 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 32.31 cM

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652128	pseudogene	Chr1:63710627-63711130 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010177	pseudogene	Chr1:63839962-63840465 (+)
A/J	MGP_AJ_G0010168	pseudogene	Chr1:61594504-61595007 (+)
AKR/J	MGP_AKRJ_G0010143	pseudogene	Chr1:63293226-63293729 (+)
BALB/cJ	MGP_BALBcJ_G0010149	pseudogene	Chr1:61671394-61671897 (+)
C3H/HeJ	MGP_C3HHeJ_G0010086	pseudogene	Chr1:63594439-63594942 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010402	pseudogene	Chr1:66311008-66311511 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009144	pseudogene	Chr1:57681885-57682390 (+)
CAST/EiJ	MGP_CASTEiJ_G0009916	pseudogene	Chr1:62858450-62858953 (+)
CBA/J	MGP_CBAJ_G0010054	pseudogene	Chr1:68449062-68449565 (+)
DBA/2J	MGP_DBA2J_G0010081	pseudogene	Chr1:61014596-61015099 (+)
FVB/NJ	MGP_FVBNJ_G0010104	pseudogene	Chr1:60293805-60294308 (+)
LP/J	MGP_LPJ_G0010166	pseudogene	Chr1:64735977-64736480 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010064	pseudogene	Chr1:71379107-71379610 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010380	pseudogene	Chr1:63293626-63294129 (+)
PWK/PhJ	MGP_PWKPhJ_G0009819	pseudogene	Chr1:60381611-60382112 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009631	pseudogene	Chr1:62788268-62788760 (+)
WSB/EiJ	MGP_WSBEiJ_G0009980	pseudogene	Chr1:63000817-63001320 (+)

Homology

• Gene Tree
  Gm12748
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm12748
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083066 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083066	Ensembl Gene Model | MGI Sequence Detail	504	C57BL/6J
transcript	ENSMUST00000120763	Ensembl | MGI Sequence Detail	504	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45