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Gm12888 Gene Detail
Summary
  • Symbol
    Gm12888
  • Name
    predicted gene 12888
  • Feature Type
    protein coding gene
  • IDs
    MGI:3652130
    NCBI Gene: 545677
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:121173513-121182114 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 56.80 cM
Strain
Comparison
more
  • SNPs within 2kb
    589 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652130
 protein coding gene Chr4:121173513-121182114 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028724
 protein coding gene Chr4:122633666-122642491 (-)
A/J MGP_AJ_G0028683
 protein coding gene Chr4:117787413-117800470 (-)
AKR/J MGP_AKRJ_G0028636
 protein coding gene Chr4:120383772-120392326 (-)
BALB/cJ MGP_BALBcJ_G0028706
 protein coding gene Chr4:118398850-118407404 (-)
C3H/HeJ MGP_C3HHeJ_G0028421
 protein coding gene Chr4:121903058-121914195 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029147
 protein coding gene Chr4:127234992-127243545 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027853
 protein coding gene Chr4:119555518-119827217 (-)
CBA/J MGP_CBAJ_G0028388
 protein coding gene Chr4:130716060-130724619 (-)
DBA/2J MGP_DBA2J_G0028535
 protein coding gene Chr4:118359228-118399911 (-)
FVB/NJ MGP_FVBNJ_G0028501
 protein coding gene Chr4:116869295-116880503 (-)
LP/J MGP_LPJ_G0028636
 protein coding gene Chr4:122743663-122752754 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028529
 protein coding gene Chr4:135485985-135496499 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029184
 protein coding gene Chr4:121463613-121472161 (-)
PWK/PhJ MGP_PWKPhJ_G0027576
 protein coding gene Chr4:115387038-115396305 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027401
 protein coding gene Chr4:117849369-117858818 (+)
WSB/EiJ MGP_WSBEiJ_G0027934
 protein coding gene Chr4:121584487-121587284 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    4 involving Gm12888
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    12 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 545677 NCBI Gene Model | MGI Sequence Detail 8602 C57BL/6J ±  kb
transcript NM_001033791 RefSeq | MGI Sequence Detail 1181 C57BL/6  
polypeptide NP_001028963 RefSeq | MGI Sequence Detail 119 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Phenotypes 9
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory