Gm11713 Gene Detail

Summary

• Symbol
  Gm11713
• Name
  predicted gene 11713

• Feature Type
  lncRNA gene
• IDs
  MGI:3652139
  NCBI Gene: 102640313
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:107301216-107304375 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 70.29 cM

Strain
Comparison

• SNPs within 2kb
  253 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652139	lncRNA gene	Chr11:107301216-107304562 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003087	antisense lncRNA gene	Chr11:110804898-110808057 (+)
A/J	MGP_AJ_G0003065	antisense lncRNA gene	Chr11:106056023-106059185 (+)
AKR/J	MGP_AKRJ_G0003046	antisense lncRNA gene	Chr11:109224632-109228621 (+)
BALB/cJ	MGP_BALBcJ_G0003052	antisense lncRNA gene	Chr11:106474086-106477246 (+)
C3H/HeJ	MGP_C3HHeJ_G0003008	antisense lncRNA gene	Chr11:109533148-109536310 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003194	antisense lncRNA gene	Chr11:114226023-114229182 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002730	antisense lncRNA gene	Chr11:103328462-103331680 (+)
CAST/EiJ	MGP_CASTEiJ_G0002977	antisense lncRNA gene	Chr11:110614696-110617537 (+)
CBA/J	MGP_CBAJ_G0003005	antisense lncRNA gene	Chr11:118941549-118944707 (+)
DBA/2J	MGP_DBA2J_G0003010	antisense lncRNA gene	Chr11:105533179-105536341 (+)
FVB/NJ	MGP_FVBNJ_G0003030	antisense lncRNA gene	Chr11:105028192-105031354 (+)
LP/J	MGP_LPJ_G0003085	antisense lncRNA gene	Chr11:111253504-111256666 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003018	antisense lncRNA gene	Chr11:118151748-118154910 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003198	antisense lncRNA gene	Chr11:109748335-109751494 (+)
PWK/PhJ	MGP_PWKPhJ_G0002935	antisense lncRNA gene	Chr11:106658051-106660861 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002879	antisense lncRNA gene	Chr11:109530887-109535756 (+)
WSB/EiJ	MGP_WSBEiJ_G0003007	antisense lncRNA gene	Chr11:109716535-109719722 (+)

Homology

• Gene Tree
  Gm11713
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  34
• Gene trapped
  34
• Find Mice (IMSR)
  8 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000085245 (Evidence)
• NCBI Gene
  102640313

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085245	Ensembl Gene Model | MGI Sequence Detail	3160	C57BL/6J
transcript	ENSMUST00000139941	Ensembl | MGI Sequence Detail	523	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9