Gm13360 Pseudogene Detail

Summary

• Symbol
  Gm13360
• Name
  predicted gene 13360
• Synonyms
  EG654360

• Feature Type
  pseudogene
• IDs
  MGI:3652147
  NCBI Gene: 654360
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:20041907-20042705 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 14.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652147	pseudogene	Chr2:20040204-20042777 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011553	pseudogene	Chr2:17798237-17799035 (-)
A/J	MGP_AJ_G0011549	pseudogene	Chr2:17064050-17064848 (-)
AKR/J	MGP_AKRJ_G0011515	pseudogene	Chr2:17672612-17673410 (-)
BALB/cJ	MGP_BALBcJ_G0011530	pseudogene	Chr2:17127861-17128659 (-)
C3H/HeJ	MGP_C3HHeJ_G0011415	pseudogene	Chr2:17576126-17576924 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011821	pseudogene	Chr2:18289212-18290010 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010359	pseudogene	Chr2:16406344-16407142 (-)
CAST/EiJ	MGP_CASTEiJ_G0011215	pseudogene	Chr2:17548431-17549229 (-)
CBA/J	MGP_CBAJ_G0011387	pseudogene	Chr2:19065666-19066464 (-)
DBA/2J	MGP_DBA2J_G0011445	pseudogene	Chr2:17005016-17005814 (-)
FVB/NJ	MGP_FVBNJ_G0011447	pseudogene	Chr2:16810973-16811771 (-)
LP/J	MGP_LPJ_G0011510	pseudogene	Chr2:17622188-17622986 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011446	pseudogene	Chr2:19037447-19038245 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011809	pseudogene	Chr2:17602014-17602812 (-)
PWK/PhJ	MGP_PWKPhJ_G0011072	pseudogene	Chr2:16887748-16888546 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010897	pseudogene	Chr2:17769108-17769905 (-)
WSB/EiJ	MGP_WSBEiJ_G0011238	pseudogene	Chr2:17679735-17680533 (-)

Homology

• Gene Tree
  Gm13360
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082164 (Evidence)
• NCBI Gene
  654360

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082164	Ensembl Gene Model | MGI Sequence Detail	799	C57BL/6J
transcript	ENSMUST00000121607	Ensembl | MGI Sequence Detail	799	Not Applicable

Other
Accession IDs

MGI:3643343

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;