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Gm12420 Pseudogene Detail
Summary
  • Symbol
    Gm12420
  • Name
    predicted gene 12420
  • Feature Type
    pseudogene
  • IDs
    MGI:3652148
    NCBI Gene: 624465
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:84616100-84617147 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 4, 39.92 cM
Strain
Comparison
more
  • SNPs within 2kb
    129 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652148
pseudogene Chr4:84616099-84617362 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012741
pseudogene Chr4:84330598-84331645 (+)
A/J MGP_AJ_G0012726
pseudogene Chr4:81410118-81411165 (+)
AKR/J MGP_AKRJ_G0012698
pseudogene Chr4:83515036-83516083 (+)
BALB/cJ MGP_BALBcJ_G0012708
pseudogene Chr4:81641104-81642151 (+)
C3H/HeJ MGP_C3HHeJ_G0012567
pseudogene Chr4:84125348-84126395 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013039
pseudogene Chr4:87630542-87631589 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011329
pseudogene Chr4:77359458-77363137 (+)
CAST/EiJ MGP_CASTEiJ_G0012323
pseudogene Chr4:82038338-82039385 (+)
CBA/J MGP_CBAJ_G0012545
pseudogene Chr4:90302785-90303832 (+)
DBA/2J MGP_DBA2J_G0012605
pseudogene Chr4:81197521-81198568 (+)
FVB/NJ MGP_FVBNJ_G0012609
pseudogene Chr4:80192472-80193519 (+)
LP/J MGP_LPJ_G0012678
pseudogene Chr4:84691245-84692292 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0012618
pseudogene Chr4:95418398-95419445 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013045
pseudogene Chr4:83572374-83573421 (+)
PWK/PhJ MGP_PWKPhJ_G0012145
pseudogene Chr4:79549865-79550914 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011957
pseudogene Chr4:81140566-81143759 (+)
WSB/EiJ MGP_WSBEiJ_G0012347
pseudogene Chr4:83741757-83742804 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm12420
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081775 Ensembl Gene Model | MGI Sequence Detail 1048 C57BL/6J ±  kb
transcript ENSMUST00000119869 Ensembl | MGI Sequence Detail 1048 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/05/2024
MGI 6.24
The Jackson Laboratory