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Cdk2ap1rt Gene Detail
Summary
  • Symbol
    Cdk2ap1rt
  • Name
    cyclin dependent kinase 2 associated protein 1 retrotransposed
  • Synonyms
    Gm12184
Location &
Maps
more
  • Sequence Map
    Chr11:48716173-48717439 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 28.80 cM
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652174
 protein coding gene Chr11:48716173-48717482 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023671
 protein coding gene Chr17:36601128-36602319 (-)
A/J MGP_AJ_G0023628
 protein coding gene Chr17:35396442-35397633 (-)
AKR/J MGP_AKRJ_G0023599
 protein coding gene Chr17:35810539-35811733 (-)
BALB/cJ MGP_BALBcJ_G0023635
 protein coding gene Chr17:35591605-35592796 (-)
C3H/HeJ MGP_C3HHeJ_G0023397
 protein coding gene Chr17:36316019-36317213 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024073
 protein coding gene Chr17:38067923-38069114 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0022886
 protein coding gene Chr17:36349996-36351184 (-)
CBA/J MGP_CBAJ_G0023375
 protein coding gene Chr17:39631880-39633074 (-)
DBA/2J MGP_DBA2J_G0023499
 protein coding gene Chr17:34754353-34755544 (-)
FVB/NJ MGP_FVBNJ_G0023472
 protein coding gene Chr17:34456127-34457318 (-)
LP/J MGP_LPJ_G0023578
 protein coding gene Chr17:37012062-37013253 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023495
 protein coding gene Chr17:38437871-38439062 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024119
 protein coding gene Chr17:36118842-36120036 (-)
PWK/PhJ MGP_PWKPhJ_G0022637
 protein coding gene Chr17:33560230-33561534 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0022955
 protein coding gene Chr17:36356823-36358013 (-)



Homology
more
  • Human Ortholog
    CDK2AP1, cyclin dependent kinase 2 associated protein 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDK2AP1, cyclin dependent kinase 2 associated protein 1
  • Synonyms
    doc-1, DOC1, DORC1, p12DOC-1, ST19
  • Links
    NCBI Gene ID: 8099
    neXtProt AC: NX_O14519
    UniProt: O14519

  • Chr Location
    12q24.31; chr12:123250112-123272334 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Genomic Mutations
    1 involving Cdk2ap1rt
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 100039945 NCBI Gene Model | MGI Sequence Detail 1267 C57BL/6J ±  kb
For the selected sequence
Other
Accession IDs
less
MGI:7461936
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory