Gm12722 Pseudogene Detail

Summary

• Symbol
  Gm12722
• Name
  predicted gene 12722

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3652209
  NCBI Gene: 433742
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:105231651-105232143 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 49.41 cM

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652209	pseudogene	Chr4:105231576-105232148 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012802	pseudogene	Chr4:105924337-105924761 (-)
A/J	MGP_AJ_G0012786	pseudogene	Chr4:102176756-102177248 (-)
AKR/J	MGP_AKRJ_G0012756	pseudogene	Chr4:104669512-104670004 (-)
BALB/cJ	MGP_BALBcJ_G0012767	pseudogene	Chr4:102373016-102373508 (-)
C3H/HeJ	MGP_C3HHeJ_G0012623	pseudogene	Chr4:105434118-105435454 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013096	pseudogene	Chr4:109825265-109825757 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011734	pseudogene	Chr5:110006785-110007355 (+)
CAST/EiJ	MGP_CASTEiJ_G0012376	pseudogene	Chr4:103196102-103196592 (-)
CBA/J	MGP_CBAJ_G0012599	pseudogene	Chr4:113331957-113332449 (-)
DBA/2J	MGP_DBA2J_G0012662	pseudogene	Chr4:101814937-101815429 (-)
FVB/NJ	MGP_FVBNJ_G0012665	pseudogene	Chr4:100655809-100656301 (-)
LP/J	MGP_LPJ_G0012736	pseudogene	Chr4:106121707-106122131 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012675	pseudogene	Chr4:118713006-118713454 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013107	pseudogene	Chr4:104911831-104912323 (-)
PWK/PhJ	MGP_PWKPhJ_G0012200	pseudogene	Chr4:100034424-100034916 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012009	pseudogene	Chr4:102286611-102287103 (-)
WSB/EiJ	MGP_WSBEiJ_G0012404	pseudogene	Chr4:105072905-105073397 (-)

Homology

• Gene Tree
  Gm12722
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12722
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000081819 (Evidence)
• NCBI Gene
  433742

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081819	Ensembl Gene Model | MGI Sequence Detail	493	C57BL/6J
transcript	ENSMUST00000118507	Ensembl | MGI Sequence Detail	493	Not Applicable
polypeptide	XP_036020550	RefSeq | MGI Sequence Detail	165	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;