Gm11481 Pseudogene Detail

Summary

• Symbol
  Gm11481
• Name
  predicted gene 11481

• Feature Type
  pseudogene
• IDs
  MGI:3652240
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:62857758-62858012 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 33.76 cM

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652240	pseudogene	Chr4:62857758-62858012 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012685	pseudogene	Chr4:61942804-61943058 (+)
A/J	MGP_AJ_G0012672	pseudogene	Chr4:59700176-59700430 (+)
AKR/J	MGP_AKRJ_G0012643	pseudogene	Chr4:61340367-61340621 (+)
BALB/cJ	MGP_BALBcJ_G0012654	pseudogene	Chr4:59864056-59864310 (+)
C3H/HeJ	MGP_C3HHeJ_G0012515	pseudogene	Chr4:61860756-61861010 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012983	pseudogene	Chr4:64073491-64073745 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011287	pseudogene	Chr4:57033781-57034035 (+)
CAST/EiJ	MGP_CASTEiJ_G0012271	pseudogene	Chr4:59806445-59806699 (+)
CBA/J	MGP_CBAJ_G0012492	pseudogene	Chr4:66294803-66295057 (+)
DBA/2J	MGP_DBA2J_G0012553	pseudogene	Chr4:59550896-59551150 (+)
FVB/NJ	MGP_FVBNJ_G0012554	pseudogene	Chr4:58804752-58805006 (+)
LP/J	MGP_LPJ_G0012625	pseudogene	Chr4:62205003-62205257 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012561	pseudogene	Chr4:69389864-69390118 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012987	pseudogene	Chr4:61444106-61444360 (+)
PWK/PhJ	MGP_PWKPhJ_G0012097	pseudogene	Chr4:58035529-58035783 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011911	pseudogene	Chr4:58904895-58905149 (+)
WSB/EiJ	MGP_WSBEiJ_G0012293	pseudogene	Chr4:61439529-61439783 (+)

Homology

• Gene Tree
  Gm11481
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082048 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082048	Ensembl Gene Model | MGI Sequence Detail	255	C57BL/6J
transcript	ENSMUST00000120069	Ensembl | MGI Sequence Detail	255	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;