Rps18-ps2 Pseudogene Detail

Summary

• Symbol
  Rps18-ps2
• Name
  ribosomal protein S18, pseudogene 2
• Synonyms
  Gm11811

• Feature Type
  pseudogene
• IDs
  MGI:3652274
  NCBI Gene: 666782
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:8941259-8941656 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 3.85 cM

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652274	pseudogene	Chr4:8941259-8941695 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012502	pseudogene	Chr4:5535684-5536081 (+)
A/J	MGP_AJ_G0012496	pseudogene	Chr4:5419494-5419891 (+)
AKR/J	MGP_AKRJ_G0012460	pseudogene	Chr4:5475767-5476164 (+)
BALB/cJ	MGP_BALBcJ_G0012479	pseudogene	Chr4:5403013-5403410 (+)
C3H/HeJ	MGP_C3HHeJ_G0012341	pseudogene	Chr4:5635171-5635568 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012792	pseudogene	Chr4:5843261-5843658 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011149	pseudogene	Chr4:5104230-5104598 (+)
CAST/EiJ	MGP_CASTEiJ_G0012110	pseudogene	Chr4:5471289-5471685 (+)
CBA/J	MGP_CBAJ_G0012321	pseudogene	Chr4:5915620-5916017 (+)
DBA/2J	MGP_DBA2J_G0012375	pseudogene	Chr4:5387724-5388121 (+)
FVB/NJ	MGP_FVBNJ_G0012376	pseudogene	Chr4:5257692-5258089 (+)
LP/J	MGP_LPJ_G0012449	pseudogene	Chr4:5546877-5547274 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012384	pseudogene	Chr4:6149610-6150007 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012796	pseudogene	Chr4:5463978-5464374 (+)
PWK/PhJ	MGP_PWKPhJ_G0011944	pseudogene	Chr4:5391446-5391843 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011764	pseudogene	Chr4:5408440-5408837 (+)
WSB/EiJ	MGP_WSBEiJ_G0012134	pseudogene	Chr4:5575829-5576226 (+)

Homology

• Gene Tree
  Rps18-ps2
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083786 (Evidence)
• NCBI Gene
  666782

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083786	Ensembl Gene Model | MGI Sequence Detail	398	C57BL/6J
transcript	ENSMUST00000119493	Ensembl | MGI Sequence Detail	398	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;