Gm12363 Pseudogene Detail

Summary

• Symbol
  Gm12363
• Name
  predicted gene 12363

• Feature Type
  pseudogene
• IDs
  MGI:3652293
  NCBI Gene: 100416086
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:34842985-34843652 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 16.86 cM

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652293	pseudogene	Chr4:34842985-34843948 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012603	pseudogene	Chr4:32440899-32441566 (+)
A/J	MGP_AJ_G0012593	pseudogene	Chr4:31272041-31272708 (+)
AKR/J	MGP_AKRJ_G0012558	pseudogene	Chr4:32097805-32098472 (+)
BALB/cJ	MGP_BALBcJ_G0012579	pseudogene	Chr4:31540365-31541032 (+)
C3H/HeJ	MGP_C3HHeJ_G0012440	pseudogene	Chr4:32406255-32406922 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012895	pseudogene	Chr4:33675300-33675967 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011220	pseudogene	Chr4:29368308-29368995 (+)
CAST/EiJ	MGP_CASTEiJ_G0012196	pseudogene	Chr4:32207045-32207712 (+)
CBA/J	MGP_CBAJ_G0012418	pseudogene	Chr4:34777193-34777860 (+)
DBA/2J	MGP_DBA2J_G0012472	pseudogene	Chr4:31242755-31243422 (+)
FVB/NJ	MGP_FVBNJ_G0012476	pseudogene	Chr4:30659192-30659859 (+)
LP/J	MGP_LPJ_G0012545	pseudogene	Chr4:32525708-32526375 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012479	pseudogene	Chr4:37368365-37369032 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012895	pseudogene	Chr4:32112858-32113525 (+)
PWK/PhJ	MGP_PWKPhJ_G0012026	pseudogene	Chr4:31272611-31273278 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012220	pseudogene	Chr4:32111445-32112112 (+)

Homology

• Gene Tree
  Gm12363
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12363
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000082367 (Evidence)
• NCBI Gene
  100416086

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082367	Ensembl Gene Model | MGI Sequence Detail	668	C57BL/6J
transcript	ENSMUST00000122250	Ensembl | MGI Sequence Detail	668	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;