Gm11689 Pseudogene Detail

Summary

• Symbol
  Gm11689
• Name
  predicted gene 11689

• Feature Type
  pseudogene
• IDs
  MGI:3652327
  NCBI Gene: 100462962
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:114555434-114555735 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 79.82 cM

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652327	pseudogene	Chr11:114555414-114555950 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010875	pseudogene	Chr11:118587024-118587325 (+)
A/J	MGP_AJ_G0010872	pseudogene	Chr11:113436594-113436895 (+)
AKR/J	MGP_AKRJ_G0010832	pseudogene	Chr11:116781076-116781377 (+)
BALB/cJ	MGP_BALBcJ_G0010850	pseudogene	Chr11:113857626-113857927 (+)
C3H/HeJ	MGP_C3HHeJ_G0010751	pseudogene	Chr11:117134850-117135151 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011122	pseudogene	Chr11:122139777-122140078 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009729	pseudogene	Chr11:110503968-110504273 (+)
CAST/EiJ	MGP_CASTEiJ_G0010576	pseudogene	Chr11:118455874-118456175 (+)
CBA/J	MGP_CBAJ_G0010722	pseudogene	Chr11:127032584-127032885 (+)
DBA/2J	MGP_DBA2J_G0010769	pseudogene	Chr11:112877788-112878089 (+)
FVB/NJ	MGP_FVBNJ_G0010786	pseudogene	Chr11:112355894-112356195 (+)
LP/J	MGP_LPJ_G0010857	pseudogene	Chr11:118997302-118997603 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010762	pseudogene	Chr11:126188376-126188677 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011101	pseudogene	Chr11:117453654-117453955 (+)
PWK/PhJ	MGP_PWKPhJ_G0010466	pseudogene	Chr11:114112914-114113215 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010281	pseudogene	Chr11:117262768-117263069 (+)
WSB/EiJ	MGP_WSBEiJ_G0010627	pseudogene	Chr11:117416271-117416572 (+)

Homology

• Gene Tree
  Gm11689
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083769 (Evidence)
• NCBI Gene
  100462962

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083769	Ensembl Gene Model | MGI Sequence Detail	302	C57BL/6J
transcript	ENSMUST00000120766	Ensembl | MGI Sequence Detail	302	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;