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Vmn2r56 Gene Detail
Summary
  • Symbol
    Vmn2r56
  • Name
    vomeronasal 2, receptor 56
  • Synonyms
    EG629079
  • Feature Type
    protein coding gene
  • IDs
    MGI:3695438
    NCBI Gene: 629079
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:12427787-12468785 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 7.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    991 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3695438
 protein coding gene Chr7:12422648-12468931 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031649
 protein coding gene Chr7:10089243-10123789 (-)
A/J MGP_AJ_G0031623
 protein coding gene Chr7:9929061-9969847 (-)
AKR/J MGP_AKRJ_G0031546
 protein coding gene Chr7:10153710-10186772 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0032092
 protein coding gene Chr7:10548255-10641841 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031307
 protein coding gene Chr7:10793614-10835382 (-)
DBA/2J MGP_DBA2J_G0031464
 protein coding gene Chr7:9705935-9862351 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0031549
 protein coding gene Chr7:10018606-10033395 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031454
 protein coding gene Chr7:10787111-10809010 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032122
 protein coding gene Chr7:9940346-9968973 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0030802
 protein coding gene Chr7:9962037-9994948 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 629079 NCBI Gene Model | MGI Sequence Detail 40999 C57BL/6J ±  kb
transcript NM_001104648 RefSeq | MGI Sequence Detail 2340 C57BL/6  
polypeptide NP_001098118 RefSeq | MGI Sequence Detail 779 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR017979 GPCR, family 3, conserved site
    IPR017978 GPCR family 3, C-terminal
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR011500 GPCR, family 3, nine cysteines domain
    IPR038550 GPCR, family 3, nine cysteines domain superfamily
    IPR004073 GPCR, family 3, vomeronasal receptor, type 2
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory