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D830025C05Rik Gene Detail
Summary
  • Symbol
    D830025C05Rik
  • Name
    RIKEN cDNA D830025C05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3698180
    NCBI Gene: 100042416
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:26087028-26089223 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 14.17 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    121 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3698180
 lncRNA gene Chr8:26087028-26089223 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036473
 pseudogene Chr8:23650110-23651130 (+)
A/J MGP_AJ_G0036459
 pseudogene Chr8:22797751-22798731 (+)
AKR/J MGP_AKRJ_G0036409
 pseudogene Chr8:23545318-23546303 (+)
BALB/cJ MGP_BALBcJ_G0036450
 pseudogene Chr8:22944597-22945585 (+)
C3H/HeJ MGP_C3HHeJ_G0036142
 pseudogene Chr8:23765359-23766332 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036962
 pseudogene Chr8:24611656-24612621 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034063
 pseudogene Chr8:20068728-20069698 (+)
CAST/EiJ MGP_CASTEiJ_G0035334
 pseudogene Chr8:23204664-23205702 (+)
CBA/J MGP_CBAJ_G0036114
 pseudogene Chr8:25572663-25573679 (+)
DBA/2J MGP_DBA2J_G0036290
 pseudogene Chr8:22769823-22771092 (+)
FVB/NJ MGP_FVBNJ_G0036245
 pseudogene Chr8:22576666-22578598 (+)
LP/J MGP_LPJ_G0036340
 pseudogene Chr8:23638021-23639013 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036245
 pseudogene Chr8:25029642-25030632 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037076
 pseudogene Chr8:23486343-23487332 (+)
PWK/PhJ MGP_PWKPhJ_G0035031
 pseudogene Chr8:22406498-22407471 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034849
 pseudogene Chr8:22851601-22852572 (+)
WSB/EiJ MGP_WSBEiJ_G0035532
 pseudogene Chr8:23705225-23707777 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043794 Ensembl Gene Model | MGI Sequence Detail 2196 C57BL/6J ±  kb
transcript ENSMUST00000210582 Ensembl | MGI Sequence Detail 2196 Not Applicable  
polypeptide Q8C3H4 UniProt | EBI | MGI Sequence Detail 159 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 10
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory