Rps19-ps3 Pseudogene Detail

Summary

• Symbol
  Rps19-ps3
• Name
  ribosomal protein S19, pseudogene 3
• Synonyms
  Gm13143

• Feature Type
  pseudogene
• IDs
  MGI:3701125
  NCBI Gene: 277692
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:147906234-147906659 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 78.56 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3701125	pseudogene	Chr4:147906234-147906659 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0012887	pseudogene	Chr4:149187582-149188007 (-)
BALB/cJ	MGP_BALBcJ_G0012898	pseudogene	Chr4:145752423-145752780 (-)
C3H/HeJ	MGP_C3HHeJ_G0012751	pseudogene	Chr4:149741141-149741566 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013255	pseudogene	Chr4:157028144-157028568 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012720	pseudogene	Chr4:161535596-161536021 (-)
DBA/2J	MGP_DBA2J_G0012795	pseudogene	Chr4:145340649-145341074 (-)
FVB/NJ	MGP_FVBNJ_G0012801	pseudogene	Chr4:144426804-144427366 (-)
LP/J	MGP_LPJ_G0012864	pseudogene	Chr4:151446042-151446467 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012813	pseudogene	Chr4:164886103-164886528 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013257	pseudogene	Chr4:149673115-149673540 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rps19-ps3
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rps19-ps3
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000080059 (Evidence)
• NCBI Gene
  277692

Representative Sequences			Length	Strain/Species
genomic	277692	NCBI Gene Model | MGI Sequence Detail	426	C57BL/6J
transcript	NR_033639	RefSeq | MGI Sequence Detail	426	Not Specified

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:3035310

References

• Summaries
  All 12

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;