Gm13285 Gene Detail

Summary

• Symbol
  Gm13285
• Name
  predicted gene 13285

• Feature Type
  protein coding gene
• IDs
  MGI:3701981
  NCBI Gene: 545654
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:88718557-88719105 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 42.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  10 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3701981	protein coding gene	Chr4:88717902-88719363 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13285
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Endonuclease-mediated
  2
• Radiation induced
  1
• Genomic Mutations
  5 involving Gm13285
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS51227.1

• Ensembl
  ENSMUSG00000095101 (Evidence)
• NCBI Gene
  545654

Representative Sequences			Length	Strain/Species
genomic	545654	NCBI Gene Model | MGI Sequence Detail	549	C57BL/6J
transcript	NM_001161609	RefSeq | MGI Sequence Detail	549	C57BL/6
polypeptide	NP_001155081	RefSeq | MGI Sequence Detail	182	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR009079 Four-helical cytokine-like, core
  IPR000471 Interferon alpha/beta/delta

References

• Summaries
  All 15

  Phenotypes 4
• Earliest
  J:81257 Oritani K, et al., Limitin: An interferon-like cytokine that preferentially influences B-lymphocyte precursors. Nat Med. 2000 Jun;6(6):659-66
• Latest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48