Gm11747 Gene Detail

Summary

• Symbol
  Gm11747
• Name
  predicted gene 11747

• Feature Type
  lncRNA gene
• IDs
  MGI:3702093
  NCBI Gene: 100126224
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:118335026-118345821 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 83.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  437 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3702093	lncRNA gene	Chr11:118335026-118345821 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003111	antisense lncRNA gene	Chr11:122767604-122778429 (-)
A/J	MGP_AJ_G0003088	antisense lncRNA gene	Chr11:117331212-117342100 (-)
AKR/J	MGP_AKRJ_G0003069	antisense lncRNA gene	Chr11:120887637-120898813 (-)
BALB/cJ	MGP_BALBcJ_G0003075	antisense lncRNA gene	Chr11:117693014-117703809 (-)
C3H/HeJ	MGP_C3HHeJ_G0003031	antisense lncRNA gene	Chr11:121197057-121207893 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003218	antisense lncRNA gene	Chr11:126531120-126541915 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002752	antisense lncRNA gene	Chr11:114329936-114340574 (-)
CAST/EiJ	MGP_CASTEiJ_G0003000	antisense lncRNA gene	Chr11:122620667-122631767 (-)
CBA/J	MGP_CBAJ_G0003028	antisense lncRNA gene	Chr11:131443866-131454733 (-)
DBA/2J	MGP_DBA2J_G0003033	antisense lncRNA gene	Chr11:116712229-116723096 (-)
FVB/NJ	MGP_FVBNJ_G0003053	antisense lncRNA gene	Chr11:116358555-116369823 (-)
LP/J	MGP_LPJ_G0003108	antisense lncRNA gene	Chr11:123091028-123101899 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003042	antisense lncRNA gene	Chr11:130438698-130449588 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003222	antisense lncRNA gene	Chr11:121553241-121564073 (-)
PWK/PhJ	MGP_PWKPhJ_G0002958	antisense lncRNA gene	Chr11:118099522-118110311 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002902	antisense lncRNA gene	Chr11:121273693-121285673 (-)
WSB/EiJ	MGP_WSBEiJ_G0003031	antisense lncRNA gene	Chr11:121508239-121519062 (-)

Homology

• Gene Tree
  Gm11747
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000086514 (Evidence)
• NCBI Gene
  100126224

Representative Sequences			Length	Strain/Species
genomic	100126224	NCBI Gene Model | MGI Sequence Detail	10796	C57BL/6J
transcript	NR_045902	RefSeq | MGI Sequence Detail	1648	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 11
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;