Gm13619 Gene Detail

Summary

• Symbol
  Gm13619
• Name
  predicted gene 13619

• Feature Type
  lncRNA gene
• IDs
  MGI:3702958
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:65682752-65690963 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 38.79 cM

Strain
Comparison

• SNPs within 2kb
  293 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3702958	lncRNA gene	Chr2:65682752-65690963 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003572	antisense lncRNA gene	Chr2:65674842-65683053 (-)
A/J	MGP_AJ_G0003553	antisense lncRNA gene	Chr2:63134483-63142688 (-)
AKR/J	MGP_AKRJ_G0003531	antisense lncRNA gene	Chr2:64850695-64858900 (-)
BALB/cJ	MGP_BALBcJ_G0003542	antisense lncRNA gene	Chr2:63299591-63307802 (-)
C3H/HeJ	MGP_C3HHeJ_G0003489	antisense lncRNA gene	Chr2:65032059-65040280 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003680	antisense lncRNA gene	Chr2:67615892-67624103 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003189	antisense lncRNA gene	Chr2:60483806-60491987 (-)
CAST/EiJ	MGP_CASTEiJ_G0003452	antisense lncRNA gene	Chr2:65054149-65062332 (-)
CBA/J	MGP_CBAJ_G0003486	antisense lncRNA gene	Chr2:70130439-70138660 (-)
DBA/2J	MGP_DBA2J_G0003494	antisense lncRNA gene	Chr2:62766101-62774314 (-)
FVB/NJ	MGP_FVBNJ_G0003514	antisense lncRNA gene	Chr2:62191304-62199483 (-)
LP/J	MGP_LPJ_G0003567	antisense lncRNA gene	Chr2:65504481-65512692 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003502	antisense lncRNA gene	Chr2:72102603-72110816 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003683	antisense lncRNA gene	Chr2:64899662-64907863 (-)
PWK/PhJ	MGP_PWKPhJ_G0003407	antisense lncRNA gene	Chr2:62583990-62592320 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003352	antisense lncRNA gene	Chr2:65070363-65078679 (-)
WSB/EiJ	MGP_WSBEiJ_G0003487	antisense lncRNA gene	Chr2:65268984-65277193 (-)

Homology

• Gene Tree
  Gm13619
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13619
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000052865 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000052865	Ensembl Gene Model | MGI Sequence Detail	8212	C57BL/6J
transcript	ENSMUST00000155722	Ensembl | MGI Sequence Detail	2138	Not Applicable
polypeptide	Q8CBY2	UniProt | EBI | MGI Sequence Detail	158	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;