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Gm6812 Gene Detail
Summary
  • Symbol
    Gm6812
  • Name
    predicted gene 6812
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3704138
    NCBI Gene: 627927
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:67935979-67936656 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 34.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    76 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704138
 lncRNA gene ChrX:67935979-67936659 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0035758
 protein coding gene ChrX:65703575-65704253 (+)
AKR/J MGP_AKRJ_G0035678
 protein coding gene ChrX:66373961-66379575 (-)
BALB/cJ MGP_BALBcJ_G0035745
 protein coding gene ChrX:64885488-64886166 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0034740
 protein coding gene ChrX:51493478-51494185 (+)
CBA/J MGP_CBAJ_G0035421
 protein coding gene ChrX:68274233-68274911 (-)
DBA/2J MGP_DBA2J_G0035574
 protein coding gene ChrX:64223482-64224160 (-)
FVB/NJ MGP_FVBNJ_G0035525
 protein coding gene ChrX:63671603-63672281 (-)
LP/J MGP_LPJ_G0035662
 protein coding gene ChrX:65304543-65305221 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0034438
 protein coding gene ChrX:48610675-48611353 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Knockout does not affect spermatogenesis or male fertility.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 627927 NCBI Gene Model | MGI Sequence Detail 678 C57BL/6J ±  kb
    transcript NR_177969 RefSeq | MGI Sequence Detail 524 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less

    • Microarray probesets 2
    References
    more
    • Summaries
      All 11
      Phenotypes 4
    • Earliest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
    • Latest
      J:292550 Morimoto K, et al., Reverse genetics reveals single gene of every candidate on Hybrid sterility, X Chromosome QTL 2 (Hstx2) are dispensable for spermatogenesis. Sci Rep. 2020 Jun 3;10(1):9060
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory