1700051O22Rik Gene Detail

Summary

• Symbol
  1700051O22Rik
• Name
  RIKEN cDNA 1700051O22 Gene
• Synonyms
  ENSMUSG00000036926

• Feature Type
  lncRNA gene
• IDs
  MGI:3704315
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:86159315-86159952 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704315	lncRNA gene	Chr8:86159315-86159952 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002267	unclassified gene	Chr8:86364983-86365620 (+)
A/J	MGP_AJ_G0002244	unclassified gene	Chr8:82954191-82954830 (+)
AKR/J	MGP_AKRJ_G0002230	unclassified gene	Chr8:85425384-85426021 (+)
BALB/cJ	MGP_BALBcJ_G0002239	unclassified gene	Chr8:83099490-83100127 (+)
C3H/HeJ	MGP_C3HHeJ_G0002215	unclassified gene	Chr8:86056125-86056764 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002364	unclassified gene	Chr8:89705630-89706267 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001979	unclassified gene	Chr8:76761230-76761868 (+)
CAST/EiJ	MGP_CASTEiJ_G0002180	unclassified gene	Chr8:85473511-85474148 (+)
CBA/J	MGP_CBAJ_G0002209	unclassified gene	Chr8:92727883-92728522 (+)
DBA/2J	MGP_DBA2J_G0002212	unclassified gene	Chr8:82606795-82607434 (+)
FVB/NJ	MGP_FVBNJ_G0002222	unclassified gene	Chr8:81551291-81551930 (+)
LP/J	MGP_LPJ_G0002266	unclassified gene	Chr8:86481124-86481761 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002196	unclassified gene	Chr8:95282006-95282643 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002352	unclassified gene	Chr8:85427237-85427874 (+)
PWK/PhJ	MGP_PWKPhJ_G0002140	unclassified gene	Chr8:81848423-81849060 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002104	unclassified gene	Chr8:84215386-84216222 (+)
WSB/EiJ	MGP_WSBEiJ_G0002207	unclassified gene	Chr8:85845482-85846119 (+)

Homology

• Gene Tree
  1700051O22Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000103341 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103341	Ensembl Gene Model | MGI Sequence Detail	638	C57BL/6J
transcript	AK006764	GenBank | ENA | DDBJ | MGI Sequence Detail	631	C57BL/6J
polypeptide	Q9CVS2	UniProt | EBI | MGI Sequence Detail	137	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;