Rps11-ps4 Pseudogene Detail

Summary

• Symbol
  Rps11-ps4
• Name
  ribosomal protein S11, pseudogene 4
• Synonyms
  Gm9808

• Feature Type
  pseudogene
• IDs
  MGI:3704389
  NCBI Gene: 100039525
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:51344270-51344743 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 22.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704389	pseudogene	Chr12:51344249-51344792 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010901	pseudogene	Chr12:50089966-50090440 (+)
A/J	MGP_AJ_G0010905	pseudogene	Chr12:48330015-48330488 (+)
AKR/J	MGP_AKRJ_G0010859	pseudogene	Chr12:49760319-49760792 (+)
BALB/cJ	MGP_BALBcJ_G0010881	pseudogene	Chr12:48599783-48600204 (+)
C3H/HeJ	MGP_C3HHeJ_G0010779	pseudogene	Chr12:49861969-49862430 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011153	pseudogene	Chr12:51647570-51648043 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009766	pseudogene	Chr12:46742242-46742715 (+)
CAST/EiJ	MGP_CASTEiJ_G0010608	pseudogene	Chr12:44907226-44907699 (+)
CBA/J	MGP_CBAJ_G0010753	pseudogene	Chr12:53427641-53428114 (+)
DBA/2J	MGP_DBA2J_G0010798	pseudogene	Chr12:48173017-48173490 (+)
FVB/NJ	MGP_FVBNJ_G0010810	pseudogene	Chr12:47627870-47628343 (+)
LP/J	MGP_LPJ_G0010883	pseudogene	Chr12:50123170-50123604 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010792	pseudogene	Chr12:55049747-55050220 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011136	pseudogene	Chr12:49261271-49261744 (+)
PWK/PhJ	MGP_PWKPhJ_G0010498	pseudogene	Chr12:42747297-42747891 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010311	pseudogene	Chr12:43849214-43849685 (+)
WSB/EiJ	MGP_WSBEiJ_G0010657	pseudogene	Chr12:49741146-49741595 (+)

Homology

• Gene Tree
  Rps11-ps4
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000046620 (Evidence)
• NCBI Gene
  100039525

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000046620	Ensembl Gene Model | MGI Sequence Detail	474	C57BL/6J
transcript	ENSMUST00000062226	Ensembl | MGI Sequence Detail	474	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;