BC038268 Gene Detail

Summary

• Symbol
  BC038268
• Name
  cDNA sequence BC038268

• Feature Type
  protein coding gene
• IDs
  MGI:3704403
  NCBI Gene: 100038756
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr13:55562714-55563405 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704403	protein coding gene	Chr13:55562714-55563405 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving BC038268
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  4
• UniProt
  1

• NCBI Gene
  100038756

Representative Sequences			Length	Strain/Species
transcript	BC038268	GenBank | ENA | DDBJ | MGI Sequence Detail	710	FVB/N
polypeptide	Q8VCP6	UniProt | EBI | MGI Sequence Detail	43	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 13

  Diseases 1

  Phenotypes 4
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57

TSS for BC038268:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119955	Chr13:55560997-55561004 (+)	-1,713 bp
Tssr119956	Chr13:55561381-55561388 (+)	-1,329 bp
Tssr119957	Chr13:55561395-55561405 (+)	-1,314 bp