Gm14634 Gene Detail

Summary

• Symbol
  Gm14634
• Name
  predicted gene 14634

• Feature Type
  lncRNA gene
• IDs
  MGI:3705147
  NCBI Gene: 552913
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  ChrX:12628517-12687731 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 7.61 cM

Strain
Comparison

• SNPs within 2kb
  1373 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705147	lncRNA gene	ChrX:12628517-12687731 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015772	unclassified non-coding RNA gene	ChrX:7588852-7652058 (+)
A/J	MGP_AJ_G0015749	unclassified non-coding RNA gene	ChrX:7691997-7754154 (+)
AKR/J	MGP_AKRJ_G0015711	unclassified non-coding RNA gene	ChrX:7915055-7981162 (+)
BALB/cJ	MGP_BALBcJ_G0015710	unclassified non-coding RNA gene	ChrX:7542311-7601281 (+)
C3H/HeJ	MGP_C3HHeJ_G0015530	unclassified non-coding RNA gene	ChrX:7691793-7752260 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016164	unclassified non-coding RNA gene	ChrX:7781317-7845142 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013888	unclassified non-coding RNA gene	ChrX:6607945-6667213 (+)
CAST/EiJ	MGP_CASTEiJ_G0015085	unclassified non-coding RNA gene	ChrX:7442077-7504806 (+)
CBA/J	MGP_CBAJ_G0015510	unclassified non-coding RNA gene	ChrX:8175199-8241716 (+)
DBA/2J	MGP_DBA2J_G0015608	unclassified non-coding RNA gene	ChrX:7530892-7589490 (+)
FVB/NJ	MGP_FVBNJ_G0015614	unclassified non-coding RNA gene	ChrX:7367681-7428624 (+)
LP/J	MGP_LPJ_G0015690	unclassified non-coding RNA gene	ChrX:7775829-7835426 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015637	unclassified non-coding RNA gene	ChrX:8098956-8164424 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016208	unclassified non-coding RNA gene	ChrX:7512745-7575966 (+)
PWK/PhJ	MGP_PWKPhJ_G0014867	unclassified non-coding RNA gene	ChrX:7037982-7098495 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014654	unclassified non-coding RNA gene	ChrX:7606495-7678242 (+)
WSB/EiJ	MGP_WSBEiJ_G0015189	unclassified non-coding RNA gene	ChrX:7580412-7638955 (+)

Homology

• Gene Tree
  Gm14634
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  16
• Gene trapped
  16
• Find Mice (IMSR)
  16 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000085891 (Evidence)
• NCBI Gene
  552913

Representative Sequences			Length	Strain/Species
genomic	552913	NCBI Gene Model | MGI Sequence Detail	59215	C57BL/6J
transcript	NR_045852	RefSeq | MGI Sequence Detail	1662	ZRU/MplStud

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm14634:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr160569	ChrX:12628484-12628532 (+)	-9 bp
Tssr160570	ChrX:12628705-12628709 (+)	190 bp