Gm15342 Gene Detail

Summary

• Symbol
  Gm15342
• Name
  predicted gene 15342

• Feature Type
  lncRNA gene
• IDs
  MGI:3705188
  NCBI Gene: 100041318
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:95837290-95839943 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 56.79 cM

Strain
Comparison

• SNPs within 2kb
  25 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705188	lncRNA gene	Chr16:95837290-95839943 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015333	unclassified non-coding RNA gene	Chr16:97387314-97389967 (+)
A/J	MGP_AJ_G0015308	unclassified non-coding RNA gene	Chr16:92771099-92773752 (+)
AKR/J	MGP_AKRJ_G0015271	unclassified non-coding RNA gene	Chr16:95638013-95640666 (+)
BALB/cJ	MGP_BALBcJ_G0015271	unclassified non-coding RNA gene	Chr16:93327001-93329654 (+)
C3H/HeJ	MGP_C3HHeJ_G0015095	unclassified non-coding RNA gene	Chr16:96155951-96158604 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015725	unclassified non-coding RNA gene	Chr16:100476026-100478679 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013467	unclassified non-coding RNA gene	Chr16:90625846-90628511 (+)
CAST/EiJ	MGP_CASTEiJ_G0014646	unclassified non-coding RNA gene	Chr16:96945918-96948617 (+)
CBA/J	MGP_CBAJ_G0015074	unclassified non-coding RNA gene	Chr16:104818950-104821603 (+)
DBA/2J	MGP_DBA2J_G0015169	unclassified non-coding RNA gene	Chr16:92657049-92659702 (+)
FVB/NJ	MGP_FVBNJ_G0015176	unclassified non-coding RNA gene	Chr16:91833112-91835765 (+)
LP/J	MGP_LPJ_G0015249	unclassified non-coding RNA gene	Chr16:97016855-97019508 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015202	unclassified non-coding RNA gene	Chr16:109045387-109048040 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015765	unclassified non-coding RNA gene	Chr16:96165048-96167701 (+)
PWK/PhJ	MGP_PWKPhJ_G0014436	unclassified non-coding RNA gene	Chr16:92953735-92956514 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014223	unclassified non-coding RNA gene	Chr16:95707577-95710257 (+)
WSB/EiJ	MGP_WSBEiJ_G0014753	unclassified non-coding RNA gene	Chr16:96432771-96435424 (+)

Homology

• Gene Tree
  Gm15342
  

Human Diseases

• References
  6 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  86 phenotype references
  

• All Mutations and Alleles
  6
• Spontaneous
  1
• Targeted
  4
• Genomic Mutations
  6 involving Gm15342
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085884 (Evidence)
• NCBI Gene
  100041318

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085884	Ensembl Gene Model | MGI Sequence Detail	2654	C57BL/6J
transcript	ENSMUST00000146222	Ensembl | MGI Sequence Detail	2100	Not Applicable

References

• Summaries
  All 91

  Diseases 6

  Phenotypes 86
• Earliest
  J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
• Latest
  J:345472 Lana-Elola E, et al., Increased dosage of DYRK1A leads to congenital heart defects in a mouse model of Down syndrome. Sci Transl Med. 2024 Jan 24;16(731):eadd6883