Gm15083 MGI Mouse Gene Detail - MGI:3705191

Sequence Map

Chr6:113981750-114029226 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705191	lncRNA gene	Chr6:113981717-114029228 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004342	antisense lncRNA gene	Chr6:116560526-116612620 (+)
A/J	MGP_AJ_G0004319	antisense lncRNA gene	Chr6:112086657-112135454 (+)
AKR/J	MGP_AKRJ_G0004302	antisense lncRNA gene	Chr6:115101231-115151916 (+)
BALB/cJ	MGP_BALBcJ_G0004305	antisense lncRNA gene	Chr6:112034941-112082600 (+)
C3H/HeJ	MGP_C3HHeJ_G0004199	antisense lncRNA gene	Chr6:69145147-69197733 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004455	antisense lncRNA gene	Chr6:119559696-119607814 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0004216	antisense lncRNA gene	Chr6:115566026-115616163 (+)
CBA/J	MGP_CBAJ_G0004248	antisense lncRNA gene	Chr6:124300612-124361223 (+)
DBA/2J	MGP_DBA2J_G0004263	antisense lncRNA gene	Chr6:111166739-111214039 (+)
FVB/NJ	MGP_FVBNJ_G0004280	antisense lncRNA gene	Chr6:110176588-110225313 (+)
LP/J	MGP_LPJ_G0004343	antisense lncRNA gene	Chr6:116583506-116630222 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004271	antisense lncRNA gene	Chr6:128514989-128566100 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004452	antisense lncRNA gene	Chr6:115128106-115178799 (+)
PWK/PhJ	MGP_PWKPhJ_G0004169	antisense lncRNA gene	Chr6:110132139-110183403 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004112	antisense lncRNA gene	Chr6:113929670-113977592 (+)
WSB/EiJ	MGP_WSBEiJ_G0004253	antisense lncRNA gene	Chr6:115493182-115543524 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000087083	Ensembl Gene Model \| MGI Sequence Detail	47477	C57BL/6J	± kb
	transcript	ENSMUST00000138670	Ensembl \| MGI Sequence Detail	1413	Not Applicable

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Summaries

All 11

Phenotypes 4
Earliest

J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
Latest

J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)

TSS for Gm15083:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr1964	Chr6:113981715-113981727 (+)	-29 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/19/2024 MGI 6.24